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Os08g0535900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.03 (0.037) R2 : 0.542
β1 : 2.86 (0.135) R2dD : 0.481 R2D : 0.383
β2 : 0.725 (0.0862) R2dC : 0.0707 R2C : 0.0692
β3 : 0.846 (0.12) R2dE : 0.0608 R2E : -0.00121
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.247 (0.0833) R2dN8 : 0.0142 R2N8 : 0.00408
σ : 0.68
deviance : 212.96
__
_____
C
peak time of C : 23.7
E
wheather : humidity
threshold : 60.41
memory length : 1642
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
211.72 0.684 6.01 2.89 0.719 0.895 0.178 -0.794 0.242 23.6 60.21 1646 -- --
212.85 0.679 6.03 2.88 0.718 0.856 0.171 -- 0.248 23.6 60.15 1643 -- --
211.85 0.678 6.01 2.89 0.718 0.892 -- -0.796 0.241 23.7 60.01 1646 -- --
212.96 0.68 6.03 2.86 0.725 0.846 -- -- 0.247 23.7 60.41 1642 -- --
244.18 0.728 6 2.89 -- 0.856 -- -0.914 0.254 -- 61 1650 -- --
236.02 0.72 5.97 2.71 0.696 -- 0.0614 -- 0.468 23.7 -- -- -- --
236.03 0.719 5.97 2.71 0.696 -- -- -- 0.468 23.8 -- -- -- --
245.66 0.73 6 2.87 -- 0.799 -- -- 0.274 -- 60.61 1643 -- --
397.87 0.929 6.03 -- 0.802 1.28 -- -- 0.233 0.0579 64.18 8387 -- --
266.51 0.763 5.96 2.73 -- -- -- -- 0.477 -- -- -- -- --
429.32 0.969 6.04 -- 0.73 -- -- -- 0.166 24 -- -- -- --
339.27 0.858 5.99 -- -- 2.13 -- -- 0.0959 -- 56 31876 -- --
462.86 1 6.03 -- -- -- -- -- 0.174 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 202.71 wind 3 30 < th dose dependent rect. 2 6
2 202.80 humidity 50 14400 < th dose independent rect. 16 20
4 202.90 wind 3 30 < th dose dependent rect. 24 8
7 203.32 wind 3 30 < th dose dependent rect. 2 4
14 204.15 humidity 50 14400 > th dose independent rect. 16 20
19 204.51 wind 3 30 < th dose dependent rect. 2 12
21 204.62 humidity 80 270 > th dose dependent rect. 1 4
27 205.01 wind 3 30 < th dose dependent rect. 2 10
35 205.31 humidity 80 90 > th dose dependent rect. 1 6
37 205.40 wind 3 90 < th dose dependent rect. 1 19
39 205.45 wind 1 270 > th dose independent rect. 3 21
40 205.47 humidity 80 14400 > th dose independent rect. 23 1
46 205.67 temperature 20 270 > th dose independent rect. 1 2
49 205.83 wind 1 270 > th dose independent rect. 4 19
50 205.86 humidity 90 30 > th dose independent rect. 2 4
51 205.86 humidity 80 270 > th dose dependent rect. 23 7
52 205.88 humidity 80 10 > th dose dependent rect. 24 6
53 205.91 humidity 80 270 > th dose independent rect. 23 6
54 205.93 humidity 50 14400 < th dose independent sin 11 NA
55 205.98 humidity 80 10 > th dose dependent rect. 2 4
64 206.07 wind 1 90 < th dose independent rect. 1 12
66 206.10 temperature 15 10 > th dose dependent rect. 2 4
80 206.30 wind 3 30 < th dose dependent sin 5 NA
86 206.35 humidity 50 14400 < th dose independent rect. 17 18
93 206.46 temperature 20 270 > th dose independent rect. 24 5
95 206.50 humidity 80 270 > th dose independent rect. 1 2
101 206.57 wind 1 270 < th dose independent rect. 1 4
113 206.81 temperature 15 270 > th dose dependent rect. 1 2
117 206.84 humidity 90 90 > th dose independent rect. 4 1
121 206.92 wind 1 90 < th dose independent rect. 1 7
126 207.00 temperature 15 270 > th dose dependent rect. 1 4
149 207.23 humidity 60 14400 < th dose dependent rect. 17 17
151 207.24 humidity 60 14400 > th dose independent rect. 3 4
174 207.51 humidity 50 14400 > th dose independent sin 11 NA
178 207.54 humidity 80 10 > th dose independent rect. 24 6
189 207.65 humidity 80 90 > th dose dependent rect. 4 1
198 207.72 radiation 30 30 < th dose dependent rect. 6 20
253 208.08 radiation 20 30 < th dose independent rect. 6 20
272 208.25 temperature 15 10 > th dose dependent rect. 24 6
280 208.31 wind 3 90 < th dose dependent rect. 4 1
330 208.66 temperature 20 10 > th dose independent rect. 2 4
345 208.78 wind 1 30 > th dose independent sin 4 NA
349 208.80 humidity 50 10 > th dose dependent rect. 6 8
364 208.89 humidity 60 14400 > th dose independent rect. 1 6
377 208.98 humidity 50 14400 < th dose independent rect. 15 2
383 209.00 humidity 50 10 > th dose dependent rect. 6 20
398 209.12 wind 1 270 < th dose independent rect. 3 2
430 209.30 humidity 60 14400 < th dose dependent rect. 16 19
441 209.37 humidity 70 4320 < th dose independent rect. 19 13
442 209.38 humidity 80 270 < th dose independent rect. 9 9
446 209.40 humidity 80 14400 < th dose independent rect. 22 2
461 209.49 wind 1 10 > th dose independent rect. 21 13
473 209.56 humidity 90 1440 < th dose dependent rect. 11 1
489 209.63 humidity 80 270 < th dose independent rect. 6 12
499 209.68 atmosphere 1000 14400 > th dose independent rect. 2 1
500 209.68 atmosphere 1000 14400 < th dose independent rect. 2 1
563 209.89 atmosphere 1015 90 < th dose dependent rect. 4 1
570 209.91 humidity 50 1440 > th dose dependent rect. 11 1
587 209.99 temperature 10 90 > th dose dependent rect. 4 1
593 210.01 wind 1 90 < th dose independent sin 4 NA
598 210.02 humidity 70 720 > th dose independent rect. 18 15
605 210.03 humidity 70 10 > th dose independent rect. 21 17
623 210.12 wind 1 270 > th dose independent rect. 4 10
650 210.19 humidity 70 1440 > th dose independent rect. 3 4
653 210.21 humidity 50 10 > th dose dependent rect. 6 10
698 210.38 humidity 60 14400 > th dose independent rect. 18 15
705 210.40 wind 3 10 < th dose independent rect. 2 4
709 210.41 atmosphere 1000 14400 < th dose dependent rect. 24 1
720 210.46 wind 1 90 > th dose independent rect. 20 13
721 210.46 atmosphere 1000 14400 < th dose dependent rect. 23 4
773 210.61 humidity 50 90 > th dose dependent rect. 3 23
823 210.72 humidity 50 10 > th dose dependent rect. 6 18
871 210.85 humidity 80 1440 < th dose dependent rect. 6 6
872 210.86 temperature 25 90 < th dose independent rect. 4 1
899 210.94 temperature 20 90 > th dose independent rect. 1 19
942 211.02 radiation 10 270 < th dose dependent rect. 5 19
962 211.08 humidity 60 270 > th dose dependent rect. 3 21
963 211.09 wind 9 14400 < th dose independent rect. 22 3
983 211.17 humidity 70 10 > th dose independent rect. 6 9
994 211.19 wind 7 14400 > th dose independent rect. 15 1