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Os08g0535100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.12 (0.0165) R2 : 0.177
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.344 (0.0348) R2dN8 : 0.229 R2N8 : 0.177
σ : 0.311
deviance : 44.38
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.17 0.279 9.13 0.174 0.254 0.366 -0.0459 -0.175 0.313 2.63 19.3 51 -- --
35.12 0.278 9.13 0.191 0.258 0.395 0.00238 -- 0.318 2.44 19.3 51 -- --
35.02 0.278 9.13 0.175 0.256 0.373 -- -0.162 0.314 2.44 19.3 51 -- --
35.12 0.278 9.13 0.191 0.258 0.395 -- -- 0.318 2.44 19.2 48 -- --
38.62 0.291 9.13 0.207 -- 0.279 -- -0.203 0.332 -- 19.2 49 -- --
39.7 0.295 9.12 0.309 0.188 -- 0.0438 -- 0.375 2.94 -- -- -- --
39.7 0.295 9.12 0.308 0.189 -- -- -- 0.374 3.08 -- -- -- --
38.78 0.291 9.12 0.227 -- 0.306 -- -- 0.337 -- 19.3 50 -- --
36 0.281 9.13 -- 0.269 0.442 -- -- 0.292 2.4 19.2 48 -- --
41.75 0.302 9.11 0.316 -- -- -- -- 0.379 -- -- -- -- --
42.2 0.304 9.12 -- 0.196 -- -- -- 0.34 3.09 -- -- -- --
40.05 0.296 9.13 -- -- 0.357 -- -- 0.306 -- 19.19 21 -- --
44.38 0.311 9.12 -- -- -- -- -- 0.344 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.55 temperature 20 10 > th dose independent rect. 18 11
3 30.86 temperature 20 10 > th dose independent rect. 20 9
17 32.18 temperature 20 10 > th dose independent rect. 9 20
21 32.32 temperature 20 90 > th dose independent rect. 7 22
31 32.63 temperature 20 10 > th dose independent rect. 7 22
62 33.23 humidity 70 720 > th dose independent rect. 17 2
67 33.28 humidity 50 720 > th dose dependent rect. 17 2
79 33.43 temperature 15 10 > th dose dependent rect. 20 9
95 33.55 temperature 15 30 > th dose dependent rect. 18 11
110 33.66 radiation 10 720 < th dose dependent rect. 14 5
113 33.68 temperature 20 90 > th dose independent sin 13 NA
117 33.70 radiation 10 720 < th dose independent rect. 14 5
121 33.71 humidity 50 720 > th dose dependent rect. 15 4
130 33.78 temperature 20 10 > th dose dependent rect. 22 7
134 33.82 temperature 20 10 > th dose independent sin 11 NA
144 33.86 temperature 20 90 < th dose independent rect. 17 12
148 33.90 radiation 10 720 < th dose dependent rect. 17 2
153 33.92 radiation 10 720 < th dose independent rect. 17 2
156 33.92 temperature 20 90 < th dose independent rect. 19 10
157 33.92 temperature 20 90 < th dose independent rect. 15 14
167 33.97 humidity 90 720 < th dose dependent rect. 12 3
170 33.99 humidity 80 720 < th dose independent rect. 12 3
178 34.05 humidity 90 720 < th dose dependent rect. 12 1
180 34.06 temperature 20 90 < th dose independent sin 13 NA
181 34.06 temperature 20 90 < th dose independent rect. 21 8
203 34.18 temperature 20 10 < th dose independent sin 11 NA
205 34.18 temperature 20 10 < th dose independent rect. 16 13
215 34.20 temperature 20 10 < th dose independent rect. 18 11
223 34.23 temperature 20 10 > th dose independent rect. 13 16
226 34.25 humidity 80 720 < th dose independent rect. 19 1
231 34.26 temperature 15 270 > th dose dependent rect. 18 9
259 34.31 humidity 90 720 < th dose dependent rect. 19 1
273 34.33 humidity 50 720 > th dose dependent rect. 7 20
307 34.43 temperature 20 10 > th dose independent rect. 22 14
318 34.45 humidity 90 720 < th dose dependent rect. 14 1
330 34.47 humidity 60 720 > th dose dependent rect. 9 19
333 34.48 humidity 90 720 < th dose dependent rect. 12 10
334 34.48 humidity 60 720 > th dose dependent rect. 14 14
350 34.50 humidity 60 720 > th dose dependent rect. 11 17
366 34.54 humidity 80 720 < th dose independent rect. 12 1
413 34.59 temperature 20 10 > th dose independent rect. 20 16
414 34.59 temperature 20 10 < th dose independent rect. 12 17
442 34.62 temperature 20 10 > th dose independent rect. 22 16
468 34.66 humidity 80 720 > th dose independent rect. 11 17
469 34.66 temperature 20 10 > th dose independent rect. 18 20
518 34.72 temperature 20 10 > th dose independent rect. 20 18
579 34.79 humidity 80 720 > th dose independent rect. 12 9
580 34.79 humidity 80 720 < th dose independent rect. 12 9
585 34.79 humidity 60 720 > th dose dependent sin 19 NA
589 34.80 temperature 20 10 > th dose independent rect. 18 18
592 34.80 temperature 20 270 > th dose dependent rect. 21 5
626 34.83 temperature 20 10 > th dose independent rect. 18 23
777 34.97 humidity 80 720 < th dose independent rect. 12 14
814 35.00 radiation 10 720 < th dose independent rect. 17 9
861 35.04 radiation 10 720 < th dose independent rect. 14 13
903 35.07 humidity 50 720 > th dose dependent rect. 7 14
956 35.11 humidity 50 10 > th dose dependent rect. 18 11
961 35.12 temperature 20 270 < th dose independent rect. 23 1
962 35.12 humidity 80 1440 > th dose independent rect. 11 4
976 35.13 humidity 80 720 > th dose independent sin 18 NA