Os08g0534300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os08g0534300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.39 | 0.263 | 9.64 | 0.119 | 0.294 | 0.352 | 0.00939 | 0.887 | -0.0272 | 0.734 | 79 | 5335 | -- | -- |
| 32.41 | 0.265 | 9.64 | 0.0937 | 0.294 | 0.404 | 0.0696 | -- | -0.0207 | 0.75 | 76.81 | 5340 | -- | -- |
| 31.39 | 0.261 | 9.64 | 0.119 | 0.293 | 0.351 | -- | 0.887 | -0.0272 | 0.724 | 78.91 | 5342 | -- | -- |
| 32.42 | 0.265 | 9.64 | 0.0921 | 0.293 | 0.413 | -- | -- | -0.0231 | 0.767 | 77 | 5342 | -- | -- |
| 36.63 | 0.282 | 9.65 | 0.142 | -- | 0.479 | -- | 0.844 | -0.0403 | -- | 80.68 | 5342 | -- | -- |
| 34.68 | 0.276 | 9.63 | 0.0952 | 0.326 | -- | 0.0946 | -- | -0.00919 | 0.569 | -- | -- | -- | -- |
| 34.72 | 0.276 | 9.63 | 0.0916 | 0.326 | -- | -- | -- | -0.00968 | 0.576 | -- | -- | -- | -- |
| 36.55 | 0.282 | 9.64 | 0.0969 | -- | 0.535 | -- | -- | -0.0395 | -- | 118 | 2443 | -- | -- |
| 32.65 | 0.266 | 9.64 | -- | 0.294 | 0.414 | -- | -- | -0.0235 | 0.781 | 76.04 | 5340 | -- | -- |
| 41.37 | 0.301 | 9.63 | 0.103 | -- | -- | -- | -- | -0.00409 | -- | -- | -- | -- | -- |
| 34.94 | 0.277 | 9.64 | -- | 0.327 | -- | -- | -- | -0.0199 | 0.59 | -- | -- | -- | -- |
| 35.49 | 0.277 | 9.63 | -- | -- | 0.565 | -- | -- | -0.0274 | -- | 101 | 1029 | -- | -- |
| 41.65 | 0.301 | 9.63 | -- | -- | -- | -- | -- | -0.0155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.23 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 4 | 29.31 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 15 | 29.45 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 35 | 29.56 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 50 | 29.61 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 69 | 29.72 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 71 | 29.72 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 76 | 29.74 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 77 | 29.75 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 81 | 29.76 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 92 | 29.80 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 94 | 29.80 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 95 | 29.81 | humidity | 80.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 97 | 29.82 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 98 | 29.83 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 107 | 29.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 123 | 29.93 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 124 | 29.94 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 125 | 29.96 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 146 | 30.03 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 149 | 30.04 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 165 | 30.10 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 171 | 30.10 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 187 | 30.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 193 | 30.15 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 5 |
| 205 | 30.19 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 3 |
| 212 | 30.21 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 4 | 8 |
| 237 | 30.27 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 2 |
| 247 | 30.29 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 280 | 30.35 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 282 | 30.35 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 14 | 3 |
| 291 | 30.37 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 293 | 30.37 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 24 | 11 |
| 301 | 30.39 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 315 | 30.40 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 321 | 30.41 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 325 | 30.41 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 330 | 30.42 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 337 | 30.42 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 351 | 30.44 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 354 | 30.44 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 12 | 5 |
| 355 | 30.44 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 5 |
| 384 | 30.48 | humidity | 80.0 | 720 | < th | dose independent | rect. | 17 | 19 |
| 422 | 30.52 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 429 | 30.52 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 10 |
| 462 | 30.55 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 12 |
| 480 | 30.57 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 528 | 30.61 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 4 | 13 |
| 536 | 30.61 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 4 | 13 |
| 560 | 30.63 | humidity | 80.0 | 720 | < th | dose dependent | sin | 10 | NA |
| 571 | 30.64 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 11 |
| 587 | 30.65 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 602 | 30.66 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 610 | 30.66 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 7 | 10 |
| 612 | 30.66 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 629 | 30.68 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 643 | 30.69 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 11 |
| 644 | 30.69 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 676 | 30.71 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 9 |
| 694 | 30.72 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 7 | NA |
| 701 | 30.72 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 710 | 30.73 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 9 |
| 719 | 30.73 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 9 |
| 739 | 30.75 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 755 | 30.75 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 13 |
| 768 | 30.76 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 785 | 30.77 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 1 | 16 |
| 792 | 30.77 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 24 | 13 |
| 793 | 30.77 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 1 | 16 |
| 794 | 30.78 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 839 | 30.79 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 24 | 17 |
| 843 | 30.80 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 5 | NA |
| 860 | 30.81 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 912 | 30.82 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 24 | 13 |
| 942 | 30.84 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 945 | 30.84 | wind | 9.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 961 | 30.85 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 982 | 30.86 | wind | 1.0 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 990 | 30.86 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 1 | 16 |