Os08g0532600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxidase (Fragment).
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Os08g0532600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peroxidase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.06 | 0.431 | 7.6 | -1.3 | 0.921 | -0.542 | -0.272 | -1.75 | -0.155 | 9.08 | 22.27 | 1353 | -- | -- |
| 89.5 | 0.441 | 7.65 | -1.94 | 1 | -0.676 | -0.263 | -- | -0.334 | 9.13 | 24.7 | 2430 | -- | -- |
| 84.31 | 0.428 | 7.6 | -1.31 | 0.923 | -0.541 | -- | -1.77 | -0.154 | 9.06 | 22.26 | 1352 | -- | -- |
| 89.67 | 0.441 | 7.67 | -1.94 | 0.988 | -0.692 | -- | -- | -0.327 | 9.29 | 24.7 | 2486 | -- | -- |
| 132.4 | 0.536 | 7.63 | -1.36 | -- | -0.548 | -- | -1.68 | -0.161 | -- | 22.3 | 1500 | -- | -- |
| 102.29 | 0.474 | 7.62 | -1.69 | 0.917 | -- | -0.33 | -- | -0.115 | 8.93 | -- | -- | -- | -- |
| 102.66 | 0.474 | 7.62 | -1.7 | 0.919 | -- | -- | -- | -0.116 | 8.89 | -- | -- | -- | -- |
| 138.11 | 0.55 | 7.67 | -1.83 | -- | -0.442 | -- | -- | -0.237 | -- | 22.3 | 1500 | -- | -- |
| 178.03 | 0.625 | 7.58 | -- | 0.925 | 0.119 | -- | -- | 0.0781 | 9.31 | 28.5 | 195 | -- | -- |
| 150.91 | 0.574 | 7.64 | -1.7 | -- | -- | -- | -- | -0.109 | -- | -- | -- | -- | -- |
| 178.82 | 0.626 | 7.58 | -- | 0.917 | -- | -- | -- | 0.0734 | 9.03 | -- | -- | -- | -- |
| 210.76 | 0.676 | 7.57 | -- | -- | 0.571 | -- | -- | 0.201 | -- | 26.39 | 655 | -- | -- |
| 227.14 | 0.703 | 7.6 | -- | -- | -- | -- | -- | 0.0792 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.31 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 2 | 84.32 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 3 | 84.46 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 4 | 84.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 17 | 84.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 35 | 84.98 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 60 | 85.31 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 65 | 85.39 | humidity | 90 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 69 | 85.42 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 70 | 85.43 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 72 | 85.45 | humidity | 90 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 73 | 85.47 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 82 | 85.59 | humidity | 90 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 89 | 85.68 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 127 | 86.01 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 149 | 86.12 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 178 | 86.26 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 200 | 86.33 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 201 | 86.33 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 205 | 86.35 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 210 | 86.39 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 211 | 86.39 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 253 | 86.53 | temperature | 20 | 270 | > th | dose dependent | sin | 10 | NA |
| 346 | 86.77 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 437 | 86.89 | wind | 1 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 467 | 86.93 | radiation | 1 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 472 | 86.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 18 |
| 481 | 86.95 | radiation | 1 | 4320 | < th | dose independent | rect. | 1 | 5 |
| 526 | 86.98 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 548 | 87.00 | radiation | 1 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 587 | 87.04 | radiation | 1 | 4320 | < th | dose independent | rect. | 21 | 9 |
| 588 | 87.04 | radiation | 1 | 4320 | < th | dose independent | rect. | 19 | 11 |
| 607 | 87.06 | temperature | 20 | 10 | > th | dose dependent | sin | 10 | NA |
| 766 | 87.22 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 775 | 87.23 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 836 | 87.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 22 |