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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0531100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : MAP65/ASE1 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.05 (0.0492) R2 : 0.237
β1 : -1.44 (0.191) R2dD : 0.125 R2D : 0.109
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.13 (0.546) R2dE : 0.0343 R2E : -0.0735
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 7.4 (1.43) R2dD*E : 0.2 R2D*E : 0.0217
γ1 : -0.49 (0.101) R2dN8 : 0.055 R2N8 : 0.00295
σ : 0.867
deviance : 346.91
__
_____
C
peak time of C : --
E
wheather : humidity
threshold : 48.96
memory length : 2605
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
342.41 0.869 3.05 -1.47 0.0573 -1.17 1.2 7.66 -0.491 8.21 49 2536 -- --
382.91 0.918 3.15 -1.53 0.0158 -0.158 1 -- -0.498 6.7 55.84 353 -- --
346.72 0.867 3.05 -1.45 0.0601 -1.07 -- 7.27 -0.487 9.66 49 2600 -- --
383.77 0.912 3.16 -1.48 0.0528 -0.313 -- -- -0.497 18.6 64.89 704 -- --
346.91 0.867 3.05 -1.44 -- -1.13 -- 7.4 -0.49 -- 48.96 2605 -- --
383.52 0.918 3.15 -1.53 0.0308 -- 1.05 -- -0.486 6.69 -- -- -- --
386.23 0.92 3.15 -1.51 0.0511 -- -- -- -0.488 10 -- -- -- --
383.92 0.913 3.16 -1.48 -- -0.287 -- -- -0.526 -- 64.79 727 -- --
439.73 0.977 3.15 -- 0.0956 -0.434 -- -- -0.385 18.2 58 725 -- --
386.38 0.918 3.15 -1.51 -- -- -- -- -0.488 -- -- -- -- --
446.26 0.988 3.11 -- 0.064 -- -- -- -0.32 11.8 -- -- -- --
439.95 0.977 3.11 -- -- -0.409 -- -- -0.307 -- 71 854 -- --
446.51 0.986 3.11 -- -- -- -- -- -0.32 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 322.84 wind 7 14400 > th dose independent rect. 23 2
2 324.37 wind 7 14400 < th dose independent rect. 23 2
3 325.95 wind 7 14400 > th dose dependent rect. 23 2
4 327.78 wind 1 14400 < th dose dependent rect. 6 5
5 328.11 temperature 20 4320 < th dose independent rect. 16 1
8 329.04 temperature 20 4320 > th dose independent rect. 16 1
13 329.90 radiation 1 14400 > th dose independent rect. 14 3
14 329.90 radiation 1 14400 < th dose independent rect. 14 3
15 329.97 wind 1 14400 > th dose independent rect. 6 5
19 330.42 wind 1 14400 > th dose independent rect. 21 16
22 330.75 wind 1 14400 > th dose independent rect. 5 8
26 330.80 radiation 1 14400 > th dose independent rect. 11 6
32 330.93 radiation 1 14400 < th dose independent rect. 11 6
38 331.14 wind 1 14400 < th dose independent rect. 6 5
40 331.16 wind 3 14400 < th dose dependent rect. 5 11
50 331.41 wind 1 14400 > th dose independent rect. 24 13
59 331.57 wind 3 14400 < th dose dependent rect. 22 2
85 331.97 wind 1 14400 < th dose independent rect. 21 16
91 332.03 wind 1 14400 > th dose independent rect. 16 21
98 332.13 wind 3 14400 < th dose dependent rect. 5 21
101 332.17 wind 1 14400 < th dose independent rect. 19 18
104 332.22 wind 1 14400 > th dose independent rect. 5 22
105 332.23 radiation 40 4320 > th dose independent rect. 7 1
121 332.23 radiation 40 4320 > th dose dependent rect. 7 1
140 332.28 wind 1 14400 > th dose independent rect. 16 19
160 332.48 wind 3 14400 < th dose dependent rect. 21 19
183 332.67 wind 1 14400 > th dose independent sin 5 NA
201 332.80 wind 1 14400 > th dose independent rect. 5 18
204 332.80 radiation 1 14400 < th dose dependent rect. 16 1
206 332.82 wind 3 14400 < th dose dependent sin 2 NA
220 332.89 wind 1 14400 < th dose dependent rect. 16 21
240 333.05 wind 3 14400 < th dose dependent rect. 12 23
262 333.17 wind 3 14400 < th dose dependent rect. 18 17
268 333.20 wind 1 14400 > th dose independent rect. 24 23
272 333.22 wind 3 14400 < th dose dependent rect. 1 23
292 333.32 wind 3 14400 < th dose dependent rect. 1 15
304 333.37 wind 1 14400 < th dose independent rect. 5 22
305 333.37 wind 3 14400 < th dose dependent rect. 10 23
317 333.46 wind 3 14400 < th dose dependent no NA NA
327 333.51 wind 1 14400 > th dose independent rect. 12 23
328 333.51 wind 1 14400 < th dose dependent rect. 16 19
349 333.60 wind 1 14400 > th dose independent rect. 10 23
378 333.72 wind 1 14400 > th dose independent no NA NA
397 333.79 humidity 50 1440 < th dose dependent rect. 12 2
416 333.87 humidity 90 4320 < th dose independent rect. 16 1
439 333.95 wind 1 1440 < th dose dependent rect. 21 1
475 334.12 wind 1 14400 < th dose independent rect. 5 18
499 334.20 wind 3 14400 < th dose dependent rect. 21 5
591 334.58 wind 1 14400 > th dose independent rect. 23 4
681 334.90 wind 1 1440 < th dose dependent rect. 17 6
722 335.07 wind 1 14400 < th dose independent rect. 24 23
733 335.13 wind 1 14400 > th dose dependent rect. 22 1
763 335.26 humidity 60 43200 > th dose independent rect. 2 5
770 335.27 wind 3 14400 < th dose dependent sin 12 NA
774 335.29 wind 1 14400 < th dose independent rect. 10 23
781 335.32 wind 1 14400 < th dose independent rect. 12 23
789 335.35 humidity 90 43200 > th dose independent rect. 13 1
800 335.38 wind 1 14400 < th dose independent no NA NA
828 335.44 humidity 50 1440 < th dose independent rect. 12 2
836 335.48 wind 3 14400 < th dose independent sin 2 NA
900 335.66 humidity 90 43200 > th dose independent rect. 15 2
928 335.74 wind 3 14400 < th dose independent rect. 7 1
941 335.78 humidity 90 43200 < th dose independent rect. 15 2