Os08g0530500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0530500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.92 | 0.43 | 8.04 | -0.179 | 1.06 | -1.43 | 0.036 | 0.232 | -0.0566 | 0.0952 | 29.71 | 240 | -- | -- |
| 83.94 | 0.427 | 8.03 | -0.137 | 1.07 | -1.43 | 0.0824 | -- | -0.0507 | 0.0609 | 29.42 | 233 | -- | -- |
| 83.91 | 0.427 | 8.04 | -0.185 | 1.07 | -1.42 | -- | 0.255 | -0.0599 | 0.068 | 29.5 | 234 | -- | -- |
| 83.95 | 0.427 | 8.03 | -0.14 | 1.07 | -1.42 | -- | -- | -0.051 | 0.0609 | 29.28 | 232 | -- | -- |
| 113 | 0.495 | 8.03 | -0.37 | -- | -1.82 | -- | 0.681 | -0.0701 | -- | 35.54 | 819 | -- | -- |
| 111.25 | 0.494 | 7.97 | 0.221 | 0.94 | -- | -0.0289 | -- | 0.243 | 22.5 | -- | -- | -- | -- |
| 111.26 | 0.494 | 7.97 | 0.222 | 0.94 | -- | -- | -- | 0.243 | 22.5 | -- | -- | -- | -- |
| 113.39 | 0.496 | 8.01 | -0.242 | -- | -1.81 | -- | -- | -0.0362 | -- | 48.97 | 821 | -- | -- |
| 84.41 | 0.428 | 8.03 | -- | 1.06 | -1.36 | -- | -- | -0.0246 | 24 | 29.32 | 232 | -- | -- |
| 165.41 | 0.601 | 7.95 | 0.238 | -- | -- | -- | -- | 0.247 | -- | -- | -- | -- | -- |
| 112.56 | 0.496 | 7.98 | -- | 0.942 | -- | -- | -- | 0.219 | 22.5 | -- | -- | -- | -- |
| 114.77 | 0.499 | 8 | -- | -- | -1.71 | -- | -- | 0.00294 | -- | 52.16 | 817 | -- | -- |
| 166.91 | 0.603 | 7.95 | -- | -- | -- | -- | -- | 0.22 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 79.02 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 21 |
| 2 | 79.05 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 9 | 80.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 18 |
| 12 | 80.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 20 |
| 26 | 81.42 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 41 | 82.35 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 48 | 82.60 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 59 | 82.99 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 95 | 83.88 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 105 | 84.05 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 111 | 84.19 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 145 | 84.90 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 146 | 84.90 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 163 | 85.18 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 174 | 85.28 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 189 | 85.42 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 219 | 85.81 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 224 | 85.87 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 226 | 85.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 235 | 85.99 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 11 |
| 237 | 86.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 9 |
| 250 | 86.07 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 279 | 86.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 327 | 86.57 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 330 | 86.58 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 342 | 86.64 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 371 | 86.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 406 | 86.94 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 408 | 86.95 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 410 | 86.96 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 411 | 86.96 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 423 | 86.99 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 424 | 86.99 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 7 |
| 453 | 87.06 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 472 | 87.12 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 721 | 87.71 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |
| 829 | 87.93 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 874 | 88.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 976 | 88.18 | temperature | 15 | 90 | > th | dose dependent | rect. | 23 | 23 |