Os08g0527300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.
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Os08g0527300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.24 | 0.461 | 4.18 | 0.902 | 1.04 | -0.928 | 0.804 | -2.41 | 0.015 | 21.6 | 5.35 | 4205 | -- | -- |
| 99.07 | 0.464 | 4.22 | 0.917 | 1.06 | -0.552 | 0.902 | -- | 0.0193 | 21.5 | 5.506 | 4608 | -- | -- |
| 98.65 | 0.463 | 4.18 | 0.869 | 1.03 | -0.924 | -- | -2.37 | 0.0154 | 21.7 | 5.3 | 4221 | -- | -- |
| 101.29 | 0.469 | 4.23 | 0.882 | 1.05 | -0.576 | -- | -- | -0.0273 | 21.8 | 5.558 | 4164 | -- | -- |
| 158.65 | 0.587 | 4.18 | 0.757 | -- | -1.06 | -- | -2.15 | 0.0171 | -- | 7.289 | 4367 | -- | -- |
| 104.47 | 0.479 | 4.23 | 1.12 | 1.07 | -- | 0.81 | -- | 0.0167 | 21.6 | -- | -- | -- | -- |
| 106.91 | 0.484 | 4.23 | 1.09 | 1.07 | -- | -- | -- | 0.015 | 21.7 | -- | -- | -- | -- |
| 162.61 | 0.594 | 4.19 | 0.856 | -- | -0.702 | -- | -- | 0.0242 | -- | 7.527 | 4420 | -- | -- |
| 113.95 | 0.497 | 4.24 | -- | 1.05 | -0.962 | -- | -- | -0.0225 | 21.7 | 7.352 | 10576 | -- | -- |
| 174.7 | 0.618 | 4.2 | 1.1 | -- | -- | -- | -- | 0.0131 | -- | -- | -- | -- | -- |
| 138.21 | 0.55 | 4.25 | -- | 1.07 | -- | -- | -- | -0.106 | 21.7 | -- | -- | -- | -- |
| 179.35 | 0.624 | 4.23 | -- | -- | -1.04 | -- | -- | -0.0349 | -- | 6.698 | 4459 | -- | -- |
| 206.54 | 0.671 | 4.22 | -- | -- | -- | -- | -- | -0.109 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.98 | atmosphere | 995 | 10 | > th | dose independent | sin | 6 | NA |
| 4 | 90.51 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 23 | 92.46 | temperature | 30 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 117 | 94.91 | atmosphere | 1005 | 90 | > th | dose independent | rect. | 18 | 10 |
| 120 | 95.11 | wind | 7 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 123 | 95.34 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 124 | 95.36 | temperature | 30 | 10 | > th | dose dependent | sin | 12 | NA |
| 126 | 95.42 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 130 | 95.57 | wind | 7 | 4320 | > th | dose independent | rect. | 14 | 7 |
| 131 | 95.61 | wind | 9 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 134 | 95.65 | wind | 7 | 4320 | < th | dose independent | rect. | 14 | 7 |
| 142 | 95.79 | wind | 7 | 14400 | > th | dose dependent | rect. | 13 | 21 |
| 149 | 95.82 | wind | 7 | 14400 | > th | dose dependent | rect. | 13 | 19 |
| 151 | 95.83 | wind | 7 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 165 | 95.90 | wind | 7 | 14400 | > th | dose independent | rect. | 13 | 22 |
| 178 | 95.96 | wind | 9 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 183 | 95.98 | wind | 9 | 14400 | < th | dose independent | rect. | 14 | 15 |
| 187 | 95.99 | wind | 7 | 4320 | < th | dose independent | rect. | 14 | 11 |
| 189 | 95.99 | wind | 7 | 14400 | < th | dose independent | rect. | 13 | 22 |
| 195 | 96.01 | wind | 9 | 14400 | > th | dose independent | rect. | 14 | 16 |
| 214 | 96.05 | wind | 7 | 4320 | > th | dose independent | sin | 17 | NA |
| 227 | 96.08 | wind | 7 | 4320 | < th | dose independent | sin | 17 | NA |
| 245 | 96.10 | wind | 7 | 14400 | > th | dose dependent | rect. | 13 | 9 |
| 246 | 96.10 | wind | 5 | 14400 | > th | dose dependent | rect. | 11 | 21 |
| 250 | 96.11 | wind | 7 | 14400 | > th | dose dependent | rect. | 13 | 12 |
| 257 | 96.13 | wind | 9 | 14400 | > th | dose independent | sin | 14 | NA |
| 268 | 96.14 | wind | 7 | 14400 | > th | dose independent | rect. | 24 | 21 |
| 290 | 96.16 | wind | 7 | 14400 | > th | dose independent | rect. | 2 | 19 |
| 291 | 96.16 | wind | 7 | 14400 | < th | dose independent | rect. | 13 | 19 |
| 327 | 96.18 | wind | 7 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 354 | 96.20 | wind | 7 | 14400 | > th | dose dependent | sin | 16 | NA |
| 356 | 96.21 | wind | 7 | 14400 | < th | dose independent | rect. | 24 | 21 |
| 361 | 96.21 | wind | 7 | 14400 | > th | dose independent | rect. | 20 | 23 |
| 367 | 96.22 | wind | 7 | 14400 | > th | dose independent | no | NA | NA |
| 382 | 96.23 | wind | 7 | 14400 | < th | dose independent | rect. | 2 | 19 |
| 390 | 96.24 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 400 | 96.25 | wind | 9 | 14400 | < th | dose independent | sin | 14 | NA |
| 451 | 96.28 | wind | 5 | 14400 | > th | dose dependent | rect. | 1 | 21 |
| 482 | 96.30 | wind | 7 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 485 | 96.30 | wind | 5 | 4320 | > th | dose dependent | rect. | 10 | 12 |
| 488 | 96.31 | wind | 7 | 14400 | < th | dose independent | no | NA | NA |
| 516 | 96.32 | wind | 7 | 14400 | < th | dose independent | rect. | 17 | 23 |
| 539 | 96.33 | wind | 5 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 588 | 96.36 | wind | 5 | 14400 | > th | dose dependent | no | NA | NA |
| 760 | 96.44 | wind | 7 | 14400 | > th | dose dependent | rect. | 17 | 22 |
| 780 | 96.45 | wind | 5 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 792 | 96.46 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 900 | 96.50 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 9 |