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Os08g0524600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ribosomal protein L32e family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.7 (0.0216) R2 : 0.478
β1 : 1.22 (0.079) R2dD : 0.282 R2D : 0.249
β2 : 0.772 (0.0563) R2dC : 0.217 R2C : 0.201
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.164 (0.0461) R2dN8 : 0.0194 R2N8 : -0.0134
σ : 0.406
deviance : 75.01
__
_____
C
peak time of C : 18.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
66.59 0.383 13.8 0.461 0.767 0.0483 0.665 -2.77 -0.0558 18.2 18.1 4402 -- --
72.5 0.397 13.7 0.962 0.776 0.33 0.639 -- 0.0103 18.1 12.57 15927 -- --
67.61 0.383 13.8 0.442 0.772 0.0554 -- -2.81 -0.0545 18.2 18 4249 -- --
73.77 0.4 13.7 1 0.775 0.284 -- -- 0.0446 18.1 12.66 15903 -- --
98.16 0.461 13.8 0.393 -- 0.0498 -- -2.78 -0.0728 -- 18.53 2931 -- --
73.66 0.402 13.7 1.22 0.769 -- 0.742 -- 0.161 18.2 -- -- -- --
75.01 0.406 13.7 1.22 0.772 -- -- -- 0.164 18.2 -- -- -- --
101.77 0.472 13.7 1.11 -- 0.442 -- -- 0.0762 -- 18.53 2931 -- --
83.61 0.426 13.8 -- 0.774 0.888 -- -- -0.237 18.1 6.653 47520 -- --
105.94 0.481 13.7 1.19 -- -- -- -- 0.146 -- -- -- -- --
114.02 0.499 13.7 -- 0.755 -- -- -- 0.0281 18.2 -- -- -- --
114.39 0.498 13.7 -- -- 0.851 -- -- -0.213 -- 10.75 46699 -- --
143.6 0.559 13.7 -- -- -- -- -- 0.0139 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 61.52 temperature 10.0 43200 > th dose independent rect. 10 6
5 62.98 temperature 15.0 270 > th dose dependent rect. 9 1
6 63.13 temperature 10.0 10 > th dose dependent rect. 9 6
12 63.44 wind 3.0 4320 > th dose independent rect. 8 1
15 63.55 wind 3.0 4320 < th dose independent rect. 8 1
20 63.68 temperature 15.0 270 > th dose dependent rect. 8 3
22 63.75 humidity 90.0 10 < th dose independent rect. 2 7
33 63.95 atmosphere 1005.0 90 < th dose dependent rect. 24 9
40 64.03 atmosphere 1005.0 10 < th dose dependent rect. 24 10
42 64.06 temperature 25.0 30 > th dose independent rect. 1 8
58 64.32 atmosphere 1005.0 10 > th dose dependent rect. 3 6
71 64.42 wind 5.0 4320 < th dose dependent rect. 8 1
76 64.50 radiation 20.0 1440 < th dose independent rect. 11 2
79 64.51 radiation 20.0 1440 < th dose dependent rect. 11 2
93 64.70 atmosphere 1005.0 270 > th dose dependent rect. 1 5
98 64.73 atmosphere 1005.0 270 > th dose dependent rect. 24 7
102 64.78 radiation 1.0 10 > th dose independent rect. 9 6
110 64.86 atmosphere 1000.0 270 > th dose independent rect. 20 15
111 64.87 wind 1.0 30 > th dose independent rect. 9 6
115 64.88 temperature 15.0 10 > th dose dependent rect. 3 6
122 64.93 temperature 10.0 10 > th dose independent rect. 9 6
124 64.93 atmosphere 995.0 10 > th dose independent rect. 9 6
125 64.93 atmosphere 1015.0 10 < th dose independent rect. 9 6
126 64.93 precipitation 0.1 10 < th dose independent rect. 9 6
127 64.93 temperature 10.0 10 > th dose independent rect. 15 18
129 64.93 precipitation 0.1 10 < th dose dependent rect. 9 6
142 64.99 temperature 10.0 1440 > th dose independent rect. 10 6
145 64.99 temperature 10.0 1440 > th dose independent rect. 16 18
156 65.04 wind 5.0 90 < th dose independent rect. 3 6
158 65.05 atmosphere 1005.0 270 > th dose dependent rect. 4 1
163 65.07 wind 9.0 30 < th dose independent rect. 15 18
186 65.20 humidity 50.0 30 > th dose independent rect. 9 6
187 65.20 radiation 10.0 1440 < th dose dependent rect. 9 6
188 65.21 wind 9.0 30 < th dose independent rect. 9 6
197 65.27 radiation 40.0 10 < th dose independent rect. 4 16
208 65.32 precipitation 0.1 10 < th dose independent rect. 15 18
211 65.32 precipitation 0.1 10 < th dose dependent rect. 15 18
229 65.39 radiation 40.0 10 < th dose independent rect. 15 18
233 65.40 atmosphere 1005.0 90 < th dose dependent rect. 3 6
234 65.41 temperature 10.0 10 > th dose dependent rect. 15 18
241 65.42 atmosphere 1000.0 270 > th dose independent rect. 18 9
243 65.42 wind 1.0 4320 > th dose dependent rect. 8 1
252 65.44 radiation 1.0 10 > th dose dependent rect. 15 18
263 65.48 wind 3.0 4320 < th dose independent rect. 6 4
275 65.49 atmosphere 1015.0 10 < th dose independent rect. 15 18
276 65.50 atmosphere 1000.0 30 > th dose independent rect. 20 8
285 65.52 wind 1.0 14400 < th dose independent rect. 24 2
290 65.54 humidity 50.0 270 > th dose independent rect. 9 1
296 65.58 temperature 15.0 4320 > th dose dependent rect. 18 3
298 65.59 temperature 15.0 4320 > th dose dependent rect. 20 1
302 65.60 precipitation 0.1 270 < th dose independent rect. 9 1
304 65.60 precipitation 0.1 270 < th dose dependent rect. 9 1
308 65.61 temperature 10.0 270 > th dose independent rect. 9 1
309 65.61 atmosphere 995.0 270 > th dose independent rect. 9 1
310 65.61 atmosphere 1015.0 270 < th dose independent rect. 9 1
313 65.61 temperature 10.0 270 > th dose independent rect. 10 23
317 65.62 wind 1.0 14400 > th dose independent rect. 24 2
318 65.62 temperature 30.0 90 < th dose independent rect. 3 6
320 65.63 wind 9.0 270 < th dose independent rect. 9 1
324 65.64 humidity 90.0 30 < th dose independent rect. 9 6
326 65.64 temperature 10.0 10 > th dose dependent rect. 9 18
327 65.65 wind 1.0 270 > th dose independent rect. 9 1
339 65.67 atmosphere 995.0 10 > th dose independent rect. 15 18
352 65.70 humidity 90.0 10 < th dose dependent rect. 15 18
361 65.73 wind 5.0 270 < th dose independent rect. 4 1
362 65.73 temperature 20.0 270 > th dose independent rect. 9 1
364 65.73 radiation 40.0 10 < th dose independent rect. 12 21
390 65.80 radiation 1.0 270 > th dose independent rect. 9 1
395 65.82 radiation 10.0 1440 > th dose independent rect. 12 1
404 65.83 radiation 30.0 90 < th dose independent rect. 3 6
405 65.83 precipitation 0.1 90 < th dose independent rect. 3 6
409 65.83 precipitation 0.1 90 < th dose dependent rect. 3 6
421 65.86 precipitation 0.1 90 < th dose independent rect. 9 18
424 65.86 precipitation 0.1 90 < th dose dependent rect. 9 18
426 65.87 radiation 40.0 90 < th dose independent rect. 3 16
440 65.89 radiation 10.0 270 < th dose independent rect. 17 10
448 65.90 humidity 50.0 30 > th dose independent rect. 9 19
454 65.91 temperature 30.0 4320 < th dose dependent rect. 18 3
457 65.92 atmosphere 995.0 1440 > th dose independent rect. 16 5
458 65.92 radiation 40.0 4320 < th dose independent rect. 16 5
467 65.93 atmosphere 995.0 90 > th dose independent rect. 9 18
476 65.94 humidity 60.0 90 > th dose independent rect. 3 6
479 65.94 atmosphere 995.0 10 > th dose independent rect. 9 19
485 65.95 temperature 10.0 90 > th dose independent rect. 3 6
488 65.95 atmosphere 995.0 90 > th dose independent rect. 3 6
489 65.95 atmosphere 1015.0 90 < th dose independent rect. 3 6
490 65.95 temperature 10.0 90 > th dose independent rect. 9 18
500 65.97 precipitation 0.1 10 < th dose independent rect. 4 5
505 65.97 precipitation 0.1 10 < th dose dependent rect. 4 5
535 66.01 atmosphere 1005.0 90 > th dose independent rect. 3 6
547 66.03 wind 9.0 270 < th dose independent rect. 10 23
552 66.04 temperature 10.0 10 > th dose independent rect. 4 5
554 66.04 temperature 30.0 10 < th dose independent rect. 4 5
555 66.04 humidity 50.0 10 > th dose independent rect. 4 5
557 66.04 atmosphere 995.0 10 > th dose independent rect. 4 5
558 66.04 atmosphere 1015.0 10 < th dose independent rect. 4 5
559 66.04 temperature 10.0 10 > th dose independent rect. 9 19
579 66.07 wind 9.0 14400 < th dose independent rect. 23 4
582 66.07 wind 9.0 90 < th dose independent rect. 9 18
601 66.08 humidity 50.0 10 > th dose independent rect. 15 18
613 66.09 temperature 20.0 4320 > th dose independent rect. 16 10
621 66.10 wind 5.0 4320 < th dose dependent rect. 6 3
628 66.11 precipitation 0.1 270 < th dose independent rect. 3 14
636 66.11 wind 9.0 90 < th dose dependent rect. 3 6
643 66.11 precipitation 0.1 270 < th dose dependent rect. 3 14
646 66.12 radiation 20.0 4320 < th dose independent rect. 17 4
654 66.12 radiation 30.0 270 < th dose dependent rect. 17 10
724 66.19 temperature 20.0 4320 < th dose independent rect. 16 10
732 66.19 atmosphere 1015.0 30 < th dose dependent rect. 15 18
737 66.20 temperature 20.0 4320 < th dose dependent rect. 16 3
739 66.20 wind 9.0 10 < th dose dependent rect. 4 5
757 66.22 temperature 10.0 270 > th dose independent rect. 17 10
758 66.22 humidity 50.0 270 > th dose independent rect. 17 10
764 66.22 temperature 10.0 270 > th dose independent rect. 3 14
765 66.22 atmosphere 1015.0 270 < th dose independent rect. 3 14
776 66.23 wind 9.0 10 < th dose independent rect. 9 19
785 66.24 atmosphere 1005.0 10 < th dose dependent rect. 4 5
790 66.25 temperature 20.0 4320 < th dose dependent rect. 18 1
820 66.28 wind 9.0 270 < th dose independent rect. 17 10
824 66.29 temperature 20.0 4320 > th dose independent sin 15 NA
866 66.31 atmosphere 1005.0 10 > th dose independent rect. 3 6
869 66.31 wind 9.0 270 < th dose independent rect. 3 14
876 66.32 temperature 20.0 4320 < th dose independent rect. 22 1
891 66.33 atmosphere 1005.0 270 < th dose dependent rect. 5 1
923 66.36 temperature 10.0 1440 > th dose independent rect. 5 5
926 66.36 atmosphere 995.0 1440 > th dose independent rect. 5 5
927 66.36 atmosphere 1015.0 1440 < th dose independent rect. 5 5
929 66.36 atmosphere 1000.0 30 < th dose independent rect. 24 9
931 66.36 temperature 10.0 1440 > th dose independent rect. 10 19
947 66.37 temperature 20.0 4320 < th dose independent sin 15 NA
957 66.37 wind 1.0 43200 < th dose dependent rect. 6 21
977 66.39 temperature 20.0 4320 > th dose independent rect. 22 1
985 66.39 atmosphere 1000.0 10 > th dose independent rect. 20 19
995 66.40 radiation 1.0 270 > th dose dependent rect. 9 1