Os08g0522600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chaperone protein dnaJ 10 (AtJ10) (AtDjC10).
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Os08g0522600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chaperone protein dnaJ 10 (AtJ10) (AtDjC10).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.54 | 0.208 | 12.9 | 0.81 | 0.0921 | -0.476 | -0.335 | -0.415 | 0.3 | 13.9 | 26.1 | 4459 | -- | -- |
| 19.58 | 0.206 | 12.9 | 0.906 | 0.0955 | -0.516 | -0.325 | -- | 0.32 | 14.1 | 26.1 | 4492 | -- | -- |
| 19.86 | 0.208 | 12.9 | 0.813 | 0.113 | -0.471 | -- | -0.358 | 0.301 | 15.6 | 26.08 | 4558 | -- | -- |
| 19.9 | 0.208 | 12.9 | 0.899 | 0.121 | -0.517 | -- | -- | 0.323 | 15.6 | 26 | 4563 | -- | -- |
| 20.46 | 0.211 | 12.9 | 0.793 | -- | -0.479 | -- | -0.433 | 0.294 | -- | 26.1 | 4366 | -- | -- |
| 28.02 | 0.248 | 12.9 | 0.74 | 0.12 | -- | -0.278 | -- | 0.316 | 14.2 | -- | -- | -- | -- |
| 28.26 | 0.249 | 12.9 | 0.732 | 0.125 | -- | -- | -- | 0.314 | 15 | -- | -- | -- | -- |
| 20.51 | 0.211 | 12.9 | 0.892 | -- | -0.522 | -- | -- | 0.313 | -- | 26.1 | 4335 | -- | -- |
| 38.95 | 0.291 | 13 | -- | 0.0877 | -0.309 | -- | -- | 0.195 | 14.4 | 28.3 | 4396 | -- | -- |
| 29.16 | 0.252 | 12.9 | 0.727 | -- | -- | -- | -- | 0.311 | -- | -- | -- | -- | -- |
| 42.39 | 0.305 | 13 | -- | 0.111 | -- | -- | -- | 0.233 | 15 | -- | -- | -- | -- |
| 39.35 | 0.292 | 13 | -- | -- | -0.324 | -- | -- | 0.19 | -- | 28.4 | 4026 | -- | -- |
| 43.1 | 0.306 | 13 | -- | -- | -- | -- | -- | 0.23 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.43 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 2 | 18.55 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 5 | 18.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 7 | 18.86 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 10 | 18.89 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 11 | 18.91 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 17 | 19.08 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 19 | 19.10 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 20 | 19.10 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 22 | 19.10 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 23 | 19.11 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 25 | 19.11 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 20 |
| 27 | 19.12 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 41 | 19.19 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 46 | 19.24 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 4 |
| 47 | 19.25 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 48 | 19.25 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 52 | 19.25 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 53 | 19.26 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 70 | 19.28 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 85 | 19.29 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 89 | 19.31 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 138 | 19.38 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 140 | 19.39 | temperature | 30.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 141 | 19.39 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 146 | 19.40 | temperature | 30.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 156 | 19.41 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 162 | 19.42 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 166 | 19.42 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 172 | 19.43 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 4 |
| 176 | 19.43 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 12 |
| 244 | 19.49 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 256 | 19.50 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 260 | 19.50 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 5 | NA |
| 273 | 19.52 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 4 |
| 283 | 19.52 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 22 | 14 |
| 366 | 19.56 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 23 | 16 |
| 375 | 19.57 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 421 | 19.59 | temperature | 30.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 437 | 19.59 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 10 |
| 468 | 19.59 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 18 | 16 |
| 518 | 19.61 | temperature | 30.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 526 | 19.61 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 535 | 19.62 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 536 | 19.62 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 614 | 19.65 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 665 | 19.66 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 670 | 19.67 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 671 | 19.67 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 942 | 19.69 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 995 | 19.70 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 7 | 1 |