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Os08g0521200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Receptor-like protein kinase 1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.98 (0.0441) R2 : 0.775
β1 : 0.854 (0.162) R2dD : 0.0153 R2D : 0.0129
β2 : 2.77 (0.116) R2dC : 0.289 R2C : 0.352
β3 : -3.59 (0.132) R2dE : 0.37 R2E : 0.448
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.553 (0.0947) R2dN8 : 0.0228 R2N8 : 0.0363
σ : 0.823
deviance : 312.04
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C
peak time of C : 6.05
E
wheather : temperature
threshold : 14.8
memory length : 69
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18.1
open length of G : 10.4

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
304.51 0.82 6.97 1.05 2.77 -3.63 -0.251 2.31 -0.527 5.9 13.72 73 18.1 10.4
312.07 0.823 6.98 0.898 2.77 -3.57 -0.2 -- -0.541 5.96 14.06 68 18.1 10.4
304.46 0.813 6.96 1.05 2.78 -3.63 -- 2.36 -0.513 5.9 13.8 68 18.1 10.4
312.04 0.823 6.98 0.854 2.77 -3.59 -- -- -0.553 6.05 14.8 69 18.1 10.4
484.04 1.02 7.07 1.53 -- -5.12 -- 5.18 -0.375 -- 14.96 226 15.4 10.8
486.51 1.03 7 0.588 3.85 -- -0.51 -- -0.833 8.45 -- -- -- --
487.34 1.03 6.99 0.572 3.85 -- -- -- -0.833 8.45 -- -- -- --
458.75 0.998 7.1 0.946 -- -5.04 -- -- -0.562 -- 14.77 318 14.7 9.72
331.51 0.848 7 -- 2.82 -3.38 -- -- -0.641 6.05 13.7 66 18.1 10.4
1315.45 1.69 7.1 0.591 -- -- -- -- -0.794 -- -- -- -- --
495.96 1.04 7.01 -- 3.85 -- -- -- -0.896 8.44 -- -- -- --
464.58 1 7.12 -- -- -4.75 -- -- -0.78 -- 12.61 396 13.2 10.2
1324.65 1.7 7.11 -- -- -- -- -- -0.86 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 310.58 temperature 15 90 > th dose dependent rect. 18 10
11 328.68 humidity 50 10 > th dose dependent rect. 5 13
14 330.71 temperature 15 10 > th dose dependent rect. 9 20
16 333.58 temperature 30 270 < th dose dependent rect. 11 20
17 335.17 temperature 30 270 < th dose dependent rect. 12 18
20 335.87 humidity 70 10 > th dose independent rect. 5 13
45 343.03 temperature 20 10 > th dose independent rect. 18 11
50 343.86 radiation 40 30 < th dose dependent rect. 5 13
56 345.43 radiation 40 30 < th dose independent rect. 5 13
93 350.14 radiation 20 30 < th dose independent rect. 5 13
109 352.17 temperature 20 10 > th dose independent rect. 9 20
194 362.23 humidity 70 10 > th dose independent rect. 21 21
196 362.36 temperature 25 270 < th dose independent rect. 11 20
205 363.15 temperature 20 90 > th dose independent rect. 7 22
212 363.47 temperature 15 90 > th dose dependent rect. 17 23
239 364.93 temperature 25 720 > th dose independent rect. 16 3
244 365.21 temperature 10 720 > th dose dependent rect. 15 5
290 368.46 atmosphere 1015 30 < th dose independent rect. 18 11
328 370.75 radiation 20 30 < th dose independent rect. 5 19
367 371.99 humidity 70 10 > th dose independent rect. 5 19
368 372.02 temperature 10 270 > th dose dependent rect. 15 22
388 372.70 radiation 30 720 < th dose independent rect. 19 14
392 372.81 humidity 80 30 < th dose dependent rect. 18 22
397 372.88 temperature 25 10 < th dose dependent rect. 5 21
408 373.15 temperature 30 10 < th dose dependent rect. 5 19
414 373.48 humidity 50 10 > th dose dependent rect. 5 19
416 373.56 radiation 20 30 < th dose independent rect. 21 21
477 375.61 temperature 25 10 < th dose dependent rect. 10 22
556 377.80 radiation 20 30 < th dose independent rect. 5 21
560 377.91 humidity 70 10 > th dose independent rect. 5 21
581 378.42 temperature 25 10 < th dose dependent rect. 21 23
606 378.81 temperature 25 30 < th dose dependent no NA NA
609 378.88 temperature 25 30 < th dose dependent rect. 15 23
616 379.04 temperature 25 30 < th dose dependent rect. 7 23
617 379.06 temperature 25 30 < th dose dependent rect. 17 23
618 379.07 temperature 25 90 < th dose dependent rect. 1 23
621 379.09 temperature 25 30 < th dose dependent rect. 19 23
626 379.14 temperature 25 30 < th dose dependent rect. 23 23
640 379.60 temperature 30 30 < th dose dependent rect. 21 21
657 379.91 radiation 40 30 < th dose independent rect. 5 19
667 380.13 temperature 30 720 < th dose dependent rect. 11 12
670 380.17 temperature 20 10 > th dose independent rect. 18 22
677 380.38 temperature 30 720 < th dose dependent rect. 10 14
694 380.69 temperature 25 10 < th dose dependent sin 16 NA
700 380.77 atmosphere 995 30 > th dose independent rect. 5 13
709 381.17 temperature 20 270 > th dose dependent sin 13 NA
731 381.51 temperature 30 270 < th dose dependent sin 14 NA
748 381.74 temperature 10 720 > th dose dependent rect. 8 12
786 382.25 temperature 30 10 < th dose dependent rect. 13 11
787 382.25 radiation 40 10 < th dose dependent rect. 5 19
789 382.27 humidity 90 10 < th dose dependent rect. 9 12
814 382.72 temperature 10 720 > th dose dependent rect. 9 10
849 383.20 humidity 80 10 < th dose dependent sin 2 NA
850 383.20 humidity 50 90 > th dose dependent rect. 21 21
901 383.82 humidity 90 10 < th dose dependent rect. 7 14
931 384.36 humidity 50 90 > th dose dependent rect. 3 23
977 385.15 humidity 70 10 > th dose independent rect. 3 23
980 385.17 temperature 25 720 < th dose independent rect. 11 13
992 385.35 temperature 25 720 < th dose independent rect. 12 11