Os08g0520700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0520700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.89 | 0.552 | 8.87 | -0.22 | 2.01 | 4.32 | -0.957 | 0.588 | -0.342 | 22.2 | 25.22 | 45 | -- | -- |
| 138.37 | 0.548 | 8.86 | -0.124 | 2.02 | 4.28 | -0.817 | -- | -0.313 | 22.2 | 25.33 | 48 | -- | -- |
| 140.91 | 0.557 | 8.86 | -0.124 | 1.95 | 4.22 | -- | 0.0119 | -0.326 | 22.2 | 25.27 | 48 | -- | -- |
| 140.91 | 0.557 | 8.86 | -0.122 | 1.95 | 4.22 | -- | -- | -0.325 | 22.2 | 25.27 | 49 | -- | -- |
| 338.76 | 0.862 | 8.75 | 0.15 | -- | 5.04 | -- | -0.346 | -0.0769 | -- | 27.15 | 19 | -- | -- |
| 406.65 | 0.945 | 9.06 | -1.14 | 2.63 | -- | -0.844 | -- | -1.19 | 23.2 | -- | -- | -- | -- |
| 409.7 | 0.948 | 9.06 | -1.11 | 2.63 | -- | -- | -- | -1.18 | 23.2 | -- | -- | -- | -- |
| 338.96 | 0.861 | 8.75 | 0.0928 | -- | 5.05 | -- | -- | -0.0903 | -- | 27.13 | 24 | -- | -- |
| 141.03 | 0.553 | 8.85 | -- | 2.05 | 4.33 | -- | -- | -0.291 | 22.1 | 25.32 | 59 | -- | -- |
| 843.35 | 1.36 | 8.99 | -1.04 | -- | -- | -- | -- | -1.16 | -- | -- | -- | -- | -- |
| 442.04 | 0.983 | 9.03 | -- | 2.62 | -- | -- | -- | -1.06 | 23.2 | -- | -- | -- | -- |
| 337.72 | 0.859 | 8.76 | -- | -- | 5.04 | -- | -- | -0.104 | -- | 27.07 | 7 | -- | -- |
| 872.07 | 1.38 | 8.97 | -- | -- | -- | -- | -- | -1.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.54 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 2 | 133.86 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 4 | 138.11 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 6 | 138.20 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 7 | 138.21 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 9 | 138.29 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 10 | 138.31 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 12 | 138.33 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 13 | 138.36 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 14 | 138.38 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 15 | 138.39 | temperature | 25 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 19 | 138.51 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 20 | 138.66 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 21 | 138.73 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 183 | 164.19 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 240 | 168.46 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 248 | 169.21 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 17 |
| 346 | 176.25 | temperature | 25 | 720 | < th | dose dependent | sin | 20 | NA |
| 567 | 189.69 | temperature | 15 | 720 | > th | dose dependent | rect. | 9 | 18 |
| 570 | 189.79 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 679 | 192.83 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 686 | 193.18 | temperature | 10 | 720 | > th | dose dependent | sin | 16 | NA |
| 773 | 195.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 813 | 196.25 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 820 | 196.36 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 834 | 196.65 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 3 |
| 848 | 196.85 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 3 |