FiT-DB / Search/ Help/ Sample detail

Os08g0519600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF1666 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.82 (0.0172) R2 : 0.747
β1 : 1.55 (0.0628) R2dD : 0.351 R2D : 0.308
β2 : 1.24 (0.0448) R2dC : 0.426 R2C : 0.403
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.205 (0.0366) R2dN8 : 0.0232 R2N8 : -0.0183
σ : 0.323
deviance : 47.47
__
_____
C
peak time of C : 18.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
44.18 0.312 6.85 1.49 1.29 -0.145 -0.492 1.89 0.172 18.1 6.514 290 -- --
44.8 0.314 6.83 1.48 1.28 -0.406 -0.294 -- 0.184 18.1 6.514 290 -- --
44.19 0.312 6.84 1.48 1.28 -0.242 -- 0.968 0.179 18.1 6.8 294 -- --
44.73 0.314 6.83 1.47 1.28 -0.497 -- -- 0.187 18.1 6.9 239 -- --
90.64 0.443 6.84 1.46 -- 0.803 -- 0.683 0.15 -- 2.701 350 -- --
47.42 0.323 6.82 1.55 1.24 -- -0.148 -- 0.205 18.2 -- -- -- --
47.47 0.323 6.82 1.55 1.24 -- -- -- 0.205 18.2 -- -- -- --
85.64 0.431 6.82 1.81 -- 0.895 -- -- 0.0979 -- 2.5 334 -- --
97.94 0.461 6.86 -- 1.25 -0.914 -- -- 0.0359 18 6.9 56 -- --
126.84 0.526 6.8 1.52 -- -- -- -- 0.177 -- -- -- -- --
110.78 0.492 6.86 -- 1.22 -- -- -- 0.032 18.3 -- -- -- --
168.71 0.605 6.86 -- -- 0.652 -- -- 0.0572 -- 2.701 353 -- --
187.44 0.639 6.84 -- -- -- -- -- 0.00922 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.62 wind 7.0 10 < th dose independent rect. 8 20
3 39.15 wind 7.0 270 < th dose independent rect. 5 22
6 39.39 wind 7.0 270 < th dose independent rect. 6 10
9 39.58 wind 7.0 10 < th dose independent rect. 8 9
12 39.71 radiation 1.0 270 < th dose dependent rect. 3 16
17 39.84 wind 7.0 90 < th dose independent rect. 8 9
23 39.97 wind 9.0 90 < th dose dependent rect. 8 19
24 39.98 atmosphere 1000.0 10 > th dose dependent rect. 4 4
32 40.11 wind 9.0 90 < th dose dependent rect. 8 9
38 40.23 radiation 1.0 270 < th dose independent rect. 2 17
40 40.26 radiation 1.0 270 < th dose dependent sin 2 NA
53 40.47 temperature 15.0 270 > th dose independent rect. 6 10
58 40.49 temperature 25.0 90 < th dose independent rect. 3 19
81 40.65 wind 5.0 270 < th dose independent rect. 3 2
93 40.75 radiation 1.0 270 < th dose dependent rect. 3 8
124 40.96 temperature 30.0 10 < th dose dependent rect. 4 19
131 40.99 radiation 1.0 270 > th dose independent rect. 17 22
133 41.00 wind 5.0 30 < th dose independent rect. 4 4
143 41.04 precipitation 0.1 30 < th dose independent rect. 8 20
145 41.04 precipitation 0.1 30 < th dose dependent rect. 8 20
152 41.06 radiation 1.0 270 < th dose independent sin 2 NA
154 41.07 atmosphere 1010.0 10 < th dose independent rect. 8 8
161 41.10 precipitation 0.1 270 < th dose independent rect. 5 22
162 41.10 precipitation 0.1 270 < th dose dependent rect. 5 22
171 41.14 radiation 1.0 270 > th dose independent sin 2 NA
172 41.14 temperature 30.0 270 < th dose dependent rect. 3 2
175 41.15 atmosphere 1000.0 270 > th dose dependent rect. 3 2
182 41.19 radiation 40.0 270 < th dose dependent rect. 15 15
187 41.22 temperature 10.0 10 > th dose dependent rect. 8 8
202 41.27 precipitation 0.1 10 < th dose independent rect. 4 4
204 41.27 precipitation 0.1 10 < th dose dependent rect. 4 4
207 41.28 precipitation 0.1 270 < th dose independent rect. 3 2
210 41.28 radiation 1.0 270 > th dose independent rect. 6 10
211 41.28 precipitation 0.1 270 < th dose dependent rect. 3 2
214 41.29 temperature 10.0 90 > th dose dependent rect. 7 9
222 41.31 humidity 80.0 270 > th dose independent rect. 3 2
226 41.32 temperature 10.0 30 > th dose independent rect. 4 4
228 41.32 temperature 30.0 30 < th dose independent rect. 4 4
229 41.32 humidity 50.0 30 > th dose independent rect. 4 4
231 41.32 atmosphere 995.0 30 > th dose independent rect. 4 4
232 41.32 atmosphere 1015.0 30 < th dose independent rect. 4 4
233 41.32 temperature 15.0 90 > th dose independent rect. 8 19
260 41.36 wind 1.0 30 > th dose independent rect. 8 20
265 41.37 radiation 1.0 270 < th dose dependent rect. 3 2
271 41.39 wind 9.0 270 < th dose dependent rect. 3 2
272 41.39 wind 9.0 10 < th dose dependent rect. 4 4
278 41.40 temperature 10.0 270 > th dose independent rect. 3 2
280 41.40 temperature 30.0 270 < th dose independent rect. 3 2
281 41.40 humidity 50.0 270 > th dose independent rect. 3 2
284 41.40 atmosphere 995.0 270 > th dose independent rect. 3 2
285 41.40 atmosphere 1010.0 270 < th dose independent rect. 3 2
287 41.40 radiation 20.0 270 < th dose independent rect. 3 2
291 41.40 radiation 1.0 270 < th dose independent rect. 2 9
293 41.40 temperature 10.0 270 > th dose independent rect. 5 22
302 41.42 radiation 40.0 270 < th dose dependent rect. 3 2
309 41.44 humidity 90.0 10 < th dose independent rect. 8 8
315 41.45 radiation 20.0 270 < th dose independent rect. 16 14
316 41.46 wind 1.0 270 > th dose independent rect. 3 2
317 41.46 atmosphere 1005.0 30 > th dose independent rect. 4 4
331 41.48 temperature 30.0 30 < th dose dependent rect. 4 4
332 41.49 radiation 1.0 270 < th dose independent rect. 3 2
339 41.52 radiation 40.0 30 < th dose independent rect. 4 4
342 41.52 radiation 1.0 270 < th dose independent rect. 2 13
369 41.58 wind 1.0 30 > th dose independent rect. 23 5
370 41.58 atmosphere 1015.0 10 < th dose independent rect. 16 16
371 41.58 humidity 50.0 270 > th dose dependent rect. 3 2
372 41.58 temperature 30.0 90 < th dose dependent rect. 23 4
397 41.62 atmosphere 995.0 270 > th dose dependent rect. 23 1
404 41.63 precipitation 0.1 270 < th dose independent rect. 6 10
408 41.63 precipitation 0.1 270 < th dose dependent rect. 6 10
414 41.64 atmosphere 995.0 270 > th dose independent rect. 16 14
416 41.64 atmosphere 995.0 30 > th dose independent rect. 8 20
427 41.66 radiation 40.0 1440 < th dose dependent rect. 24 5
437 41.67 temperature 30.0 270 < th dose dependent rect. 23 1
458 41.70 atmosphere 1015.0 270 < th dose independent rect. 6 10
459 41.70 temperature 10.0 270 > th dose independent rect. 16 14
460 41.70 radiation 40.0 270 < th dose independent rect. 16 14
461 41.70 wind 7.0 10 < th dose independent rect. 23 17
488 41.74 atmosphere 995.0 30 > th dose dependent rect. 23 5
506 41.77 temperature 30.0 90 < th dose dependent rect. 3 8
509 41.78 temperature 10.0 10 > th dose independent rect. 8 8
512 41.78 precipitation 0.1 10 < th dose independent rect. 8 8
513 41.78 temperature 10.0 10 > th dose independent rect. 16 16
515 41.78 precipitation 0.1 10 < th dose dependent rect. 8 8
531 41.81 humidity 50.0 10 > th dose independent rect. 16 16
543 41.82 wind 7.0 90 < th dose independent rect. 22 17
547 41.82 temperature 30.0 10 < th dose dependent rect. 23 5
556 41.84 atmosphere 995.0 10 > th dose independent rect. 8 8
558 41.84 atmosphere 995.0 10 > th dose independent rect. 16 16
588 41.87 temperature 10.0 10 > th dose dependent rect. 8 20
589 41.88 wind 7.0 270 < th dose independent rect. 23 1
632 41.91 atmosphere 995.0 270 > th dose independent rect. 6 9
642 41.92 wind 9.0 1440 < th dose independent rect. 5 4
643 41.92 temperature 10.0 1440 > th dose independent rect. 5 4
646 41.92 humidity 50.0 1440 > th dose independent rect. 5 4
648 41.92 atmosphere 995.0 1440 > th dose independent rect. 5 4
649 41.92 atmosphere 1015.0 1440 < th dose independent rect. 5 4
660 41.92 temperature 10.0 1440 > th dose independent rect. 9 20
668 41.93 temperature 10.0 270 > th dose independent rect. 23 1
669 41.93 temperature 30.0 270 < th dose independent rect. 23 1
670 41.93 humidity 50.0 270 > th dose independent rect. 23 1
673 41.93 atmosphere 995.0 270 > th dose independent rect. 23 1
674 41.93 radiation 1.0 270 < th dose independent rect. 23 1
695 41.93 temperature 10.0 270 > th dose independent rect. 24 23
696 41.93 radiation 1.0 270 < th dose dependent rect. 23 1
702 41.94 precipitation 0.1 270 < th dose independent rect. 23 1
705 41.94 precipitation 0.1 270 < th dose dependent rect. 23 1
732 41.96 wind 1.0 270 > th dose independent rect. 23 1
742 41.96 radiation 40.0 30 < th dose independent rect. 8 20
750 41.97 radiation 1.0 30 > th dose independent rect. 8 10
805 42.00 wind 9.0 270 < th dose independent rect. 16 14
819 42.01 wind 9.0 30 < th dose independent rect. 16 16
835 42.02 atmosphere 1015.0 270 < th dose independent rect. 1 20
853 42.04 temperature 10.0 1440 > th dose independent rect. 9 8
858 42.04 humidity 50.0 270 > th dose independent rect. 15 15
859 42.04 temperature 10.0 1440 > th dose independent rect. 17 16
862 42.04 precipitation 0.1 10 < th dose independent rect. 16 16
863 42.04 precipitation 0.1 10 < th dose dependent rect. 16 16
871 42.05 temperature 30.0 270 < th dose dependent rect. 1 8
877 42.07 radiation 1.0 10 > th dose independent rect. 8 8
884 42.08 wind 1.0 270 > th dose independent rect. 20 6
898 42.09 radiation 40.0 10 < th dose independent rect. 16 16
907 42.10 wind 7.0 270 < th dose independent rect. 20 6
914 42.11 wind 7.0 270 < th dose independent rect. 21 4
936 42.12 wind 1.0 10 > th dose independent rect. 8 8
960 42.14 temperature 10.0 10 > th dose dependent rect. 4 4
983 42.17 wind 7.0 30 < th dose independent rect. 23 5
984 42.17 precipitation 0.1 270 < th dose independent rect. 16 14
988 42.17 precipitation 0.1 270 < th dose dependent rect. 16 14
992 42.18 humidity 90.0 10 < th dose independent rect. 4 4