Os08g0515700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF547 domain containing protein.
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Os08g0515700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF547 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 144.25 | 0.564 | 8.58 | -0.163 | 0.78 | 1.09 | -0.913 | 3.72 | -0.113 | 8.81 | 28.19 | 1196 | -- | -- |
| 144.7 | 0.56 | 8.69 | -0.948 | 0.84 | 1.61 | -0.918 | -- | -0.3 | 8.88 | 27.16 | 1152 | -- | -- |
| 145.47 | 0.562 | 8.58 | -0.127 | 0.802 | 1.15 | -- | 3.79 | -0.141 | 8.44 | 27.01 | 1152 | -- | -- |
| 147.25 | 0.565 | 8.69 | -0.986 | 0.894 | 1.64 | -- | -- | -0.326 | 8.55 | 26.92 | 1129 | -- | -- |
| 178.97 | 0.623 | 8.59 | 0.012 | -- | 1.04 | -- | 4.14 | -0.156 | -- | 26.6 | 1285 | -- | -- |
| 245.55 | 0.735 | 8.69 | -0.506 | 0.729 | -- | -0.733 | -- | -0.322 | 7.77 | -- | -- | -- | -- |
| 246.44 | 0.735 | 8.69 | -0.529 | 0.745 | -- | -- | -- | -0.324 | 7.23 | -- | -- | -- | -- |
| 183.02 | 0.63 | 8.67 | -0.936 | -- | 1.38 | -- | -- | -0.18 | -- | 28.35 | 1268 | -- | -- |
| 170.37 | 0.608 | 8.64 | -- | 0.827 | 1.37 | -- | -- | -0.121 | 8.42 | 28.2 | 1150 | -- | -- |
| 275.84 | 0.776 | 8.71 | -0.516 | -- | -- | -- | -- | -0.311 | -- | -- | -- | -- | -- |
| 253.82 | 0.745 | 8.68 | -- | 0.74 | -- | -- | -- | -0.265 | 7.28 | -- | -- | -- | -- |
| 203.53 | 0.664 | 8.64 | -- | -- | 1.24 | -- | -- | 0.00816 | -- | 30.79 | 1217 | -- | -- |
| 282.86 | 0.785 | 8.7 | -- | -- | -- | -- | -- | -0.254 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.35 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 3 | 143.57 | temperature | 25 | 720 | > th | dose dependent | sin | 13 | NA |
| 5 | 143.82 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 52 | 149.95 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 55 | 150.43 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 56 | 150.48 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 62 | 150.63 | temperature | 30 | 1440 | > th | dose dependent | rect. | 14 | 5 |
| 78 | 150.80 | radiation | 30 | 1440 | < th | dose dependent | rect. | 15 | 16 |
| 166 | 151.89 | radiation | 20 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 185 | 151.93 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 9 |
| 189 | 151.99 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 296 | 152.73 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 304 | 152.83 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 6 |
| 306 | 152.87 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 310 | 152.88 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 317 | 152.94 | radiation | 20 | 1440 | < th | dose independent | rect. | 15 | 12 |
| 325 | 153.01 | radiation | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 330 | 153.05 | radiation | 20 | 1440 | > th | dose independent | sin | 13 | NA |
| 392 | 153.55 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 427 | 153.64 | radiation | 20 | 1440 | < th | dose independent | sin | 13 | NA |
| 457 | 153.79 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 555 | 153.95 | radiation | 20 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 573 | 154.01 | radiation | 1 | 1440 | > th | dose dependent | sin | 13 | NA |
| 597 | 154.19 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 602 | 154.24 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 635 | 154.48 | temperature | 30 | 1440 | > th | dose independent | sin | 13 | NA |
| 650 | 154.61 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 786 | 155.16 | temperature | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 854 | 155.43 | temperature | 15 | 720 | > th | dose dependent | rect. | 13 | 10 |