Os08g0515000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sulfotransferase family protein.
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Os08g0515000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sulfotransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 165.55 | 0.605 | 3.66 | -1.88 | 0.379 | 2.05 | 0.0921 | 4.8 | -0.0317 | 1.39 | 1.02 | 4340 | -- | -- |
| 179.93 | 0.625 | 3.51 | -1.21 | 0.13 | 1.71 | 0.0419 | -- | 0.288 | 2.12 | 3.914 | 5904 | -- | -- |
| 165.56 | 0.599 | 3.66 | -1.88 | 0.353 | 2.06 | -- | 4.82 | -0.0313 | 1.46 | 1.029 | 4349 | -- | -- |
| 175.63 | 0.617 | 3.52 | -1.13 | 0.244 | 1.6 | -- | -- | 0.26 | 1.92 | 3.779 | 7345 | -- | -- |
| 169.74 | 0.607 | 3.7 | -1.87 | -- | 2.08 | -- | 4.85 | -0.0679 | -- | 0.8307 | 13224 | -- | -- |
| 212.83 | 0.684 | 3.61 | -1.39 | 0.386 | -- | 0.0903 | -- | -0.139 | 1 | -- | -- | -- | -- |
| 212.87 | 0.683 | 3.61 | -1.4 | 0.386 | -- | -- | -- | -0.139 | 1.01 | -- | -- | -- | -- |
| 176.81 | 0.619 | 3.52 | -1.18 | -- | 1.68 | -- | -- | 0.248 | -- | 3.969 | 7474 | -- | -- |
| 184.6 | 0.633 | 3.46 | -- | 0.217 | 1.81 | -- | -- | 0.499 | 2.26 | 2.056 | 17533 | -- | -- |
| 222.13 | 0.696 | 3.61 | -1.38 | -- | -- | -- | -- | -0.132 | -- | -- | -- | -- | -- |
| 264.4 | 0.761 | 3.58 | -- | 0.363 | -- | -- | -- | 0.0165 | 0.85 | -- | -- | -- | -- |
| 174.81 | 0.616 | 3.48 | -- | -- | 1.67 | -- | -- | 0.442 | -- | 1.317 | 34945 | -- | -- |
| 272.64 | 0.771 | 3.57 | -- | -- | -- | -- | -- | 0.0218 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.68 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 25 | 152.28 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 43 | 152.89 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 55 | 153.19 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 58 | 153.24 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 5 |
| 61 | 153.29 | temperature | 25 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 89 | 153.51 | temperature | 25 | 14400 | > th | dose dependent | sin | 20 | NA |
| 167 | 153.85 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 175 | 153.89 | temperature | 25 | 14400 | > th | dose independent | rect. | 1 | 18 |
| 176 | 153.90 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 180 | 153.91 | temperature | 25 | 14400 | > th | dose independent | sin | 3 | NA |
| 251 | 154.08 | temperature | 25 | 14400 | < th | dose independent | rect. | 1 | 18 |
| 265 | 154.12 | temperature | 25 | 14400 | < th | dose independent | sin | 3 | NA |
| 638 | 154.70 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 722 | 154.79 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 20 |
| 829 | 154.88 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 927 | 155.00 | temperature | 25 | 14400 | > th | dose independent | no | NA | NA |
| 936 | 155.01 | temperature | 25 | 14400 | > th | dose independent | rect. | 16 | 23 |
| 937 | 155.01 | temperature | 20 | 14400 | > th | dose dependent | rect. | 8 | 2 |
| 960 | 155.04 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 21 |
| 964 | 155.05 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 19 |