Os08g0514000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Concanavalin A-like lectin/glucanase domain containing protein.
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Os08g0514000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Concanavalin A-like lectin/glucanase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.78 | 0.541 | 6.94 | 1.24 | 0.473 | -2.69 | -0.618 | 1.25 | -0.153 | 18.6 | 15.61 | 709 | -- | -- |
| 133.74 | 0.539 | 6.97 | 1.03 | 0.558 | -2.82 | -0.278 | -- | -0.206 | 18.1 | 14.8 | 661 | -- | -- |
| 133.47 | 0.538 | 6.94 | 1.24 | 0.558 | -2.71 | -- | 1.21 | -0.149 | 17.9 | 15.8 | 647 | -- | -- |
| 133.9 | 0.539 | 6.97 | 1.01 | 0.558 | -2.8 | -- | -- | -0.215 | 18 | 14.8 | 647 | -- | -- |
| 136.68 | 0.544 | 6.93 | 1.27 | -- | -2.5 | -- | 1.1 | -0.166 | -- | 10.26 | 1058 | -- | -- |
| 230.91 | 0.712 | 7.05 | 0.304 | 0.35 | -- | 0.376 | -- | -0.647 | 10.9 | -- | -- | -- | -- |
| 231.45 | 0.712 | 7.05 | 0.321 | 0.348 | -- | -- | -- | -0.645 | 11.3 | -- | -- | -- | -- |
| 136.28 | 0.544 | 6.95 | 1.16 | -- | -2.28 | -- | -- | -0.187 | -- | -0.6918 | 2276 | -- | -- |
| 157.09 | 0.584 | 7.01 | -- | 0.635 | -2.43 | -- | -- | -0.377 | 16.8 | 14.91 | 495 | -- | -- |
| 239.04 | 0.722 | 7.06 | 0.312 | -- | -- | -- | -- | -0.648 | -- | -- | -- | -- | -- |
| 234.16 | 0.716 | 7.06 | -- | 0.345 | -- | -- | -- | -0.68 | 11.2 | -- | -- | -- | -- |
| 161.56 | 0.592 | 7 | -- | -- | -2.11 | -- | -- | -0.409 | -- | 10.28 | 902 | -- | -- |
| 241.61 | 0.726 | 7.07 | -- | -- | -- | -- | -- | -0.682 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 122.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 27 | 123.57 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 37 | 123.93 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 41 | 124.21 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 9 |
| 64 | 124.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 3 |
| 69 | 125.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 107 | 126.77 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 111 | 126.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 112 | 126.93 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 227 | 128.44 | temperature | 30 | 1440 | < th | dose dependent | sin | 11 | NA |
| 228 | 128.45 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 290 | 128.90 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 389 | 129.76 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 427 | 130.00 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 536 | 130.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 563 | 130.90 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 593 | 131.08 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 594 | 131.09 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 595 | 131.10 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 597 | 131.11 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 622 | 131.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 675 | 131.50 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 691 | 131.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 737 | 131.73 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 887 | 132.19 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 939 | 132.37 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |