Os08g0513600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0513600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.53 | 0.427 | 9.72 | 1.04 | 0.1 | 1.78 | 0.808 | 1.73 | 0.167 | 1.28 | 0.74 | 1436 | -- | -- |
| 84.02 | 0.427 | 9.71 | 1.19 | 0.145 | 1.37 | 0.706 | -- | 0.162 | 0.63 | 0.83 | 1423 | -- | -- |
| 84.44 | 0.428 | 9.72 | 1.09 | 0.272 | 1.63 | -- | 1.07 | 0.155 | 22.8 | 0.7301 | 1405 | -- | -- |
| 85.04 | 0.43 | 9.71 | 1.18 | 0.411 | 1.5 | -- | -- | 0.184 | 22.3 | 0.7893 | 1363 | -- | -- |
| 85.09 | 0.43 | 9.72 | 1.01 | -- | 1.81 | -- | 1.8 | 0.156 | -- | 0.74 | 1463 | -- | -- |
| 105.76 | 0.482 | 9.73 | 0.858 | 0.0851 | -- | 0.607 | -- | 0.00648 | 0.997 | -- | -- | -- | -- |
| 106.55 | 0.483 | 9.74 | 0.839 | 0.143 | -- | -- | -- | 0.00556 | 21.2 | -- | -- | -- | -- |
| 86.47 | 0.433 | 9.69 | 1.18 | -- | 1.42 | -- | -- | 0.186 | -- | 0.8249 | 1455 | -- | -- |
| 117.61 | 0.505 | 9.73 | -- | 0.468 | 1.03 | -- | -- | 0.0779 | 21.4 | 1.628 | 1304 | -- | -- |
| 107.74 | 0.485 | 9.73 | 0.839 | -- | -- | -- | -- | 0.00487 | -- | -- | -- | -- | -- |
| 125.09 | 0.523 | 9.76 | -- | 0.144 | -- | -- | -- | -0.0879 | 21.7 | -- | -- | -- | -- |
| 117.9 | 0.506 | 9.71 | -- | -- | 0.855 | -- | -- | 0.042 | -- | 1.713 | 1500 | -- | -- |
| 126.32 | 0.525 | 9.76 | -- | -- | -- | -- | -- | -0.0882 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.44 | radiation | 40.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 6 | 77.47 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 7 | 77.60 | radiation | 40.0 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 29 | 77.83 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 33 | 78.02 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 35 | 78.04 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 37 | 78.09 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 41 | 78.13 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 58 | 78.23 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 79 | 78.28 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 88 | 78.33 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 130 | 78.45 | radiation | 40.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 132 | 78.46 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 135 | 78.48 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 142 | 78.53 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 145 | 78.54 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 159 | 78.56 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 160 | 78.56 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 161 | 78.56 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 167 | 78.58 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 197 | 78.66 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 207 | 78.70 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 9 |
| 219 | 78.78 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 4 | 7 |
| 249 | 78.79 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 304 | 78.86 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 410 | 78.98 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 412 | 78.98 | radiation | 10.0 | 43200 | > th | dose dependent | sin | 9 | NA |
| 448 | 79.02 | radiation | 20.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 543 | 79.13 | radiation | 40.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 580 | 79.17 | radiation | 40.0 | 43200 | > th | dose dependent | no | NA | NA |
| 829 | 79.26 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 1 |