Os08g0512900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0512900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.49 | 0.272 | 11.3 | -0.77 | 0.693 | 0.319 | -0.228 | -5.34 | -0.0682 | 4.79 | 30.08 | 2608 | -- | -- |
| 35.69 | 0.278 | 11.1 | 0.284 | 0.72 | -0.247 | -0.333 | -- | 0.00647 | 4.81 | 30.1 | 5729 | -- | -- |
| 33.62 | 0.27 | 11.3 | -0.774 | 0.691 | 0.319 | -- | -5.37 | -0.0679 | 4.75 | 30.07 | 2607 | -- | -- |
| 35.61 | 0.278 | 11.1 | 0.252 | 0.667 | -0.264 | -- | -- | 0.00974 | 4.85 | 30.3 | 5889 | -- | -- |
| 57.21 | 0.352 | 11.2 | -0.559 | -- | 0.277 | -- | -5.73 | -0.0279 | -- | 30.21 | 2068 | -- | -- |
| 39.16 | 0.293 | 11.1 | 0.145 | 0.661 | -- | -0.328 | -- | 0.0246 | 4.89 | -- | -- | -- | -- |
| 39.43 | 0.294 | 11.1 | 0.146 | 0.658 | -- | -- | -- | 0.0262 | 4.85 | -- | -- | -- | -- |
| 57.53 | 0.353 | 11.1 | 0.263 | -- | -0.341 | -- | -- | 0.0334 | -- | 30.3 | 6315 | -- | -- |
| 36.88 | 0.283 | 11.1 | -- | 0.677 | -0.242 | -- | -- | -0.0216 | 4.87 | 30.3 | 5888 | -- | -- |
| 62.29 | 0.369 | 11.1 | 0.171 | -- | -- | -- | -- | 0.0433 | -- | -- | -- | -- | -- |
| 40 | 0.296 | 11.1 | -- | 0.661 | -- | -- | -- | 0.00994 | 4.84 | -- | -- | -- | -- |
| 59.24 | 0.358 | 11.1 | -- | -- | -0.295 | -- | -- | 0.00125 | -- | 30.7 | 6295 | -- | -- |
| 63.06 | 0.371 | 11.1 | -- | -- | -- | -- | -- | 0.0243 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.04 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 3 | 32.16 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 17 |
| 4 | 32.22 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 12 |
| 9 | 32.26 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 11 | 32.33 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 5 |
| 17 | 32.57 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 18 | 32.58 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 7 |
| 46 | 32.80 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 17 |
| 50 | 32.82 | humidity | 70.0 | 1440 | > th | dose independent | sin | 11 | NA |
| 54 | 32.84 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 56 | 32.84 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 14 |
| 74 | 32.90 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 82 | 32.95 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 3 |
| 86 | 32.97 | humidity | 70.0 | 720 | > th | dose independent | sin | 13 | NA |
| 166 | 33.36 | humidity | 70.0 | 720 | > th | dose independent | rect. | 10 | 11 |
| 167 | 33.37 | humidity | 70.0 | 720 | > th | dose independent | sin | 16 | NA |
| 193 | 33.45 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 203 | 33.48 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 205 | 33.49 | humidity | 70.0 | 720 | > th | dose independent | rect. | 10 | 18 |
| 209 | 33.50 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 211 | 33.51 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 213 | 33.51 | humidity | 70.0 | 720 | > th | dose independent | rect. | 9 | 14 |
| 232 | 33.53 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 237 | 33.54 | humidity | 70.0 | 1440 | < th | dose independent | sin | 11 | NA |
| 238 | 33.54 | humidity | 70.0 | 720 | < th | dose independent | sin | 13 | NA |
| 242 | 33.54 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 244 | 33.55 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 267 | 33.55 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 291 | 33.60 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 318 | 33.67 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 20 |
| 324 | 33.68 | humidity | 50.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 361 | 33.74 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 22 |
| 362 | 33.74 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 19 | 4 |
| 370 | 33.75 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 372 | 33.75 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 376 | 33.76 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 398 | 33.77 | humidity | 50.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 436 | 33.79 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 439 | 33.79 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 443 | 33.81 | temperature | 30.0 | 1440 | < th | dose independent | sin | 12 | NA |
| 460 | 33.82 | temperature | 30.0 | 1440 | > th | dose independent | sin | 13 | NA |
| 461 | 33.82 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 465 | 33.82 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 608 | 33.86 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 621 | 33.88 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 624 | 33.88 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 8 |
| 627 | 33.88 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 16 |
| 638 | 33.89 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 721 | 33.92 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 789 | 33.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 17 |
| 791 | 33.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 19 |
| 793 | 33.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 19 |
| 798 | 33.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 21 |
| 799 | 33.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 21 |
| 800 | 33.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 23 |
| 801 | 33.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 803 | 33.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 23 |
| 804 | 33.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 808 | 33.94 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 824 | 33.94 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 13 |
| 833 | 33.94 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 15 |
| 860 | 33.94 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 19 |
| 894 | 33.94 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 898 | 33.94 | temperature | 25.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 904 | 33.95 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 910 | 33.95 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 941 | 33.95 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 13 | NA |