Os08g0508000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os08g0508000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.56 | 0.551 | 3.12 | -0.21 | 0.0117 | -0.561 | 0.448 | 5.71 | 0.0504 | 10.8 | 46.55 | 620 | -- | -- |
| 143.24 | 0.557 | 3.13 | -0.13 | 0.0139 | 0.845 | -0.111 | -- | -0.0497 | 11.3 | 45.13 | 593 | -- | -- |
| 138.01 | 0.547 | 3.11 | -0.203 | 0.0745 | -0.583 | -- | 5.42 | 0.052 | 6.66 | 46.08 | 605 | -- | -- |
| 138.38 | 0.548 | 3.15 | -0.255 | 0.0607 | 1.55 | -- | -- | 0.0556 | 8.58 | 46.07 | 600 | -- | -- |
| 138.12 | 0.547 | 3.12 | -0.18 | -- | -0.149 | -- | 4.11 | 0.0581 | -- | 46.57 | 607 | -- | -- |
| 151.94 | 0.578 | 3.16 | -0.102 | 0.0348 | -- | -0.369 | -- | 0.0375 | 3.91 | -- | -- | -- | -- |
| 152.3 | 0.578 | 3.16 | -0.0978 | 0.0397 | -- | -- | -- | 0.0397 | 1.24 | -- | -- | -- | -- |
| 138.48 | 0.548 | 3.15 | -0.257 | -- | 1.5 | -- | -- | 0.0567 | -- | 46.06 | 602 | -- | -- |
| 140.01 | 0.551 | 3.14 | -- | 0.0632 | 1.43 | -- | -- | 0.0826 | 6.89 | 46.65 | 606 | -- | -- |
| 152.39 | 0.577 | 3.16 | -0.0962 | -- | -- | -- | -- | 0.0405 | -- | -- | -- | -- | -- |
| 152.55 | 0.578 | 3.15 | -- | 0.038 | -- | -- | -- | 0.0506 | 1.14 | -- | -- | -- | -- |
| 140.16 | 0.551 | 3.15 | -- | -- | 1.39 | -- | -- | 0.0825 | -- | 46.51 | 607 | -- | -- |
| 152.64 | 0.577 | 3.15 | -- | -- | -- | -- | -- | 0.0512 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 132.94 | radiation | 1 | 10 | > th | dose independent | rect. | 17 | 1 |
| 13 | 134.90 | humidity | 50 | 720 | > th | dose independent | rect. | 6 | 21 |
| 15 | 135.41 | humidity | 50 | 720 | > th | dose independent | rect. | 1 | 17 |
| 17 | 135.65 | humidity | 50 | 720 | > th | dose independent | rect. | 6 | 13 |
| 19 | 135.73 | humidity | 50 | 720 | > th | dose independent | rect. | 7 | 11 |
| 21 | 136.52 | humidity | 50 | 720 | > th | dose independent | rect. | 6 | 15 |
| 27 | 136.90 | humidity | 50 | 270 | > th | dose independent | rect. | 22 | 23 |
| 34 | 137.60 | humidity | 50 | 720 | > th | dose independent | rect. | 11 | 16 |
| 35 | 137.65 | humidity | 50 | 720 | > th | dose independent | rect. | 8 | 7 |
| 38 | 137.92 | humidity | 50 | 720 | > th | dose independent | rect. | 23 | 16 |
| 44 | 138.04 | humidity | 50 | 720 | > th | dose independent | rect. | 15 | 23 |
| 56 | 138.15 | humidity | 50 | 720 | > th | dose independent | rect. | 18 | 21 |
| 57 | 138.16 | humidity | 50 | 270 | > th | dose independent | rect. | 13 | 14 |
| 60 | 138.22 | wind | 7 | 1440 | < th | dose independent | rect. | 24 | 8 |
| 67 | 138.32 | wind | 1 | 10 | < th | dose independent | rect. | 14 | 8 |
| 69 | 138.33 | humidity | 60 | 720 | < th | dose dependent | rect. | 11 | 5 |
| 70 | 138.35 | humidity | 50 | 720 | > th | dose independent | rect. | 11 | 8 |
| 82 | 138.60 | wind | 5 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 84 | 138.65 | humidity | 60 | 720 | < th | dose dependent | rect. | 13 | 3 |
| 85 | 138.69 | wind | 5 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 86 | 138.70 | wind | 7 | 1440 | > th | dose independent | rect. | 23 | 6 |
| 94 | 138.74 | temperature | 30 | 270 | < th | dose independent | rect. | 13 | 14 |
| 96 | 138.76 | humidity | 50 | 720 | > th | dose independent | rect. | 6 | 7 |
| 98 | 138.76 | wind | 7 | 1440 | > th | dose dependent | rect. | 23 | 9 |
| 106 | 138.79 | humidity | 50 | 720 | > th | dose independent | rect. | 3 | 12 |
| 120 | 138.84 | humidity | 50 | 720 | < th | dose independent | rect. | 13 | 2 |
| 125 | 138.86 | temperature | 30 | 90 | < th | dose independent | rect. | 1 | 18 |
| 165 | 138.96 | temperature | 30 | 270 | < th | dose independent | rect. | 22 | 23 |
| 169 | 138.97 | temperature | 30 | 270 | < th | dose independent | rect. | 22 | 21 |
| 193 | 139.11 | humidity | 50 | 720 | < th | dose independent | rect. | 12 | 5 |
| 195 | 139.12 | wind | 7 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 201 | 139.14 | humidity | 50 | 720 | > th | dose independent | rect. | 1 | 14 |
| 210 | 139.17 | wind | 7 | 1440 | < th | dose independent | rect. | 24 | 3 |
| 228 | 139.26 | humidity | 50 | 720 | < th | dose dependent | rect. | 13 | 22 |
| 316 | 139.39 | humidity | 50 | 720 | < th | dose dependent | sin | 18 | NA |
| 400 | 139.53 | humidity | 50 | 720 | < th | dose dependent | no | NA | NA |
| 541 | 139.56 | humidity | 50 | 720 | > th | dose independent | sin | 23 | NA |
| 546 | 139.57 | temperature | 30 | 90 | > th | dose dependent | rect. | 18 | 16 |
| 570 | 139.66 | humidity | 50 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 638 | 139.79 | humidity | 50 | 720 | > th | dose independent | rect. | 13 | 6 |
| 640 | 139.79 | temperature | 30 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 658 | 139.84 | humidity | 50 | 720 | < th | dose independent | sin | 1 | NA |
| 739 | 139.94 | temperature | 30 | 270 | < th | dose independent | rect. | 23 | 19 |
| 754 | 139.99 | temperature | 30 | 90 | > th | dose independent | rect. | 8 | 1 |
| 857 | 140.04 | humidity | 50 | 720 | > th | dose independent | no | NA | NA |