Os08g0507100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os08g0507100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 729.11 | 1.27 | 4.03 | 1.75 | 0.133 | -4.57 | -1.34 | -5.45 | 1.1 | 6.33 | 8.764 | 4330 | 15 | 5.05 |
| 735.55 | 1.26 | 3.93 | 1.46 | 0.15 | -3.62 | -0.856 | -- | 1.19 | 6.34 | 8.767 | 4332 | 15 | 5.06 |
| 732.81 | 1.26 | 4.02 | 1.68 | 0.163 | -4.47 | -- | -4.93 | 1.11 | 6.94 | 8.797 | 4328 | 14.9 | 5.07 |
| 736.38 | 1.26 | 3.92 | 1.43 | 0.206 | -3.54 | -- | -- | 1.19 | 7.4 | 8.8 | 4332 | 15 | 5.04 |
| 733.87 | 1.26 | 4.02 | 1.74 | -- | -4.55 | -- | -5.03 | 1.13 | -- | 8.757 | 4329 | 14.9 | 5.13 |
| 951.07 | 1.45 | 3.94 | 0.502 | 0.737 | -- | -0.708 | -- | 1.07 | 7.43 | -- | -- | -- | -- |
| 952.31 | 1.45 | 3.94 | 0.488 | 0.734 | -- | -- | -- | 1.07 | 7.67 | -- | -- | -- | -- |
| 737.73 | 1.27 | 3.92 | 1.44 | -- | -3.67 | -- | -- | 1.18 | -- | 8.8 | 4334 | 15 | 5.03 |
| 776.78 | 1.3 | 3.9 | -- | 0.203 | -3.39 | -- | -- | 1.3 | 7.49 | 8.9 | 4331 | 16.2 | 5.21 |
| 981.31 | 1.46 | 3.95 | 0.497 | -- | -- | -- | -- | 1.08 | -- | -- | -- | -- | -- |
| 958.57 | 1.45 | 3.95 | -- | 0.738 | -- | -- | -- | 1.02 | 7.63 | -- | -- | -- | -- |
| 777.9 | 1.3 | 3.9 | -- | -- | -3.52 | -- | -- | 1.31 | -- | 8.899 | 4333 | 16.2 | 5.41 |
| 987.84 | 1.47 | 3.97 | -- | -- | -- | -- | -- | 1.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 742.52 | wind | 7 | 4320 | > th | dose dependent | rect. | 16 | 4 |
| 2 | 743.15 | wind | 9 | 4320 | < th | dose independent | rect. | 15 | 5 |
| 4 | 744.13 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 6 | 744.65 | wind | 9 | 4320 | > th | dose independent | rect. | 15 | 5 |
| 7 | 745.03 | wind | 9 | 4320 | < th | dose independent | rect. | 15 | 20 |
| 10 | 745.86 | wind | 9 | 4320 | > th | dose independent | rect. | 15 | 20 |
| 11 | 745.96 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 16 | 747.01 | wind | 9 | 4320 | > th | dose dependent | rect. | 15 | 19 |
| 18 | 747.39 | wind | 7 | 4320 | > th | dose dependent | rect. | 18 | 2 |
| 20 | 747.97 | wind | 9 | 4320 | < th | dose independent | rect. | 15 | 7 |
| 23 | 748.10 | wind | 9 | 4320 | > th | dose dependent | rect. | 15 | 8 |
| 24 | 748.15 | wind | 9 | 4320 | > th | dose independent | rect. | 15 | 8 |
| 25 | 748.24 | wind | 9 | 4320 | > th | dose independent | rect. | 15 | 11 |
| 29 | 748.30 | wind | 7 | 4320 | > th | dose dependent | rect. | 15 | 13 |
| 33 | 748.42 | wind | 9 | 4320 | > th | dose dependent | rect. | 15 | 11 |
| 37 | 748.48 | wind | 9 | 4320 | > th | dose dependent | rect. | 17 | 6 |
| 56 | 748.95 | wind | 9 | 4320 | > th | dose dependent | rect. | 17 | 17 |
| 60 | 749.26 | wind | 9 | 4320 | < th | dose independent | rect. | 15 | 11 |
| 69 | 749.67 | wind | 9 | 4320 | < th | dose independent | rect. | 15 | 13 |
| 71 | 749.78 | wind | 9 | 4320 | < th | dose independent | rect. | 15 | 15 |
| 88 | 750.74 | wind | 9 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 90 | 750.80 | wind | 9 | 4320 | > th | dose dependent | rect. | 17 | 9 |
| 112 | 752.20 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 6 |
| 120 | 752.61 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 17 |
| 158 | 754.00 | wind | 9 | 4320 | > th | dose dependent | sin | 12 | NA |
| 161 | 754.21 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 12 |
| 167 | 754.27 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 188 | 755.13 | wind | 9 | 4320 | > th | dose independent | sin | 12 | NA |
| 246 | 758.69 | wind | 9 | 4320 | < th | dose independent | sin | 12 | NA |
| 405 | 766.34 | wind | 7 | 4320 | < th | dose independent | rect. | 11 | 22 |
| 430 | 767.17 | wind | 7 | 4320 | > th | dose independent | rect. | 11 | 22 |
| 450 | 767.64 | wind | 7 | 4320 | > th | dose dependent | rect. | 21 | 23 |
| 451 | 767.68 | wind | 7 | 4320 | > th | dose independent | rect. | 21 | 23 |
| 463 | 767.99 | wind | 7 | 4320 | < th | dose independent | rect. | 21 | 23 |
| 471 | 768.22 | wind | 7 | 4320 | > th | dose dependent | rect. | 11 | 22 |
| 482 | 768.59 | wind | 7 | 4320 | < th | dose independent | rect. | 11 | 18 |
| 484 | 768.74 | wind | 7 | 4320 | > th | dose dependent | rect. | 7 | 22 |
| 490 | 768.80 | wind | 7 | 4320 | < th | dose independent | rect. | 7 | 22 |
| 495 | 768.87 | wind | 7 | 4320 | > th | dose dependent | rect. | 11 | 18 |
| 502 | 769.00 | wind | 7 | 4320 | > th | dose independent | rect. | 7 | 22 |
| 508 | 769.10 | wind | 7 | 4320 | > th | dose dependent | no | NA | NA |
| 512 | 769.13 | wind | 7 | 4320 | > th | dose dependent | rect. | 4 | 23 |
| 524 | 769.22 | wind | 7 | 4320 | < th | dose independent | no | NA | NA |
| 530 | 769.28 | wind | 7 | 4320 | > th | dose independent | rect. | 11 | 18 |
| 533 | 769.31 | wind | 7 | 4320 | > th | dose independent | no | NA | NA |
| 539 | 769.37 | wind | 7 | 4320 | > th | dose dependent | rect. | 24 | 23 |
| 541 | 769.38 | wind | 7 | 4320 | > th | dose independent | rect. | 24 | 23 |
| 545 | 769.50 | wind | 7 | 4320 | < th | dose independent | rect. | 24 | 23 |
| 553 | 769.58 | wind | 7 | 4320 | > th | dose independent | rect. | 4 | 23 |
| 582 | 769.86 | wind | 7 | 4320 | < th | dose independent | rect. | 4 | 23 |