Os08g0504500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0504500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135.25 | 0.546 | 12.2 | -1.54 | 1.42 | 1.26 | 2.1 | 5.72 | -0.826 | 21.1 | 24.69 | 250 | 1.87 | -- |
| 144.58 | 0.56 | 12.3 | -1.96 | 1.6 | 1.61 | 2.21 | -- | -1.07 | 20.7 | 23.87 | 253 | 1.79 | -- |
| 150.36 | 0.571 | 12.2 | -1.61 | 1.39 | 1.17 | -- | 5.28 | -0.827 | 21 | 24.68 | 251 | 1.87 | -- |
| 154.41 | 0.579 | 12.3 | -2.15 | 1.51 | 1.55 | -- | -- | -1.03 | 20.9 | 24.09 | 241 | 1.55 | -- |
| 231.02 | 0.708 | 12.1 | -1.75 | -- | 1.29 | -- | 3.56 | -0.851 | -- | 24.84 | 324 | 4.87 | -- |
| 177.36 | 0.624 | 12.2 | -1.91 | 1.25 | -- | 1.77 | -- | -0.819 | 20.3 | -- | -- | -- | -- |
| 187.14 | 0.641 | 12.2 | -1.96 | 1.25 | -- | -- | -- | -0.818 | 20.3 | -- | -- | -- | -- |
| 218.71 | 0.689 | 12.2 | -2.29 | -- | 1.27 | -- | -- | -0.951 | -- | 24.48 | 924 | 1.76e-07 | -- |
| 271.83 | 0.768 | 12.2 | -- | 1.39 | 1.06 | -- | -- | -0.713 | 20.7 | 24.89 | 208 | 1.9 | -- |
| 273.32 | 0.773 | 12.2 | -1.97 | -- | -- | -- | -- | -0.832 | -- | -- | -- | -- | -- |
| 288.59 | 0.795 | 12.1 | -- | 1.26 | -- | -- | -- | -0.6 | 20.2 | -- | -- | -- | -- |
| 343.06 | 0.863 | 12.2 | -- | -- | 1.28 | -- | -- | -0.882 | -- | 21.95 | 671 | 16.5 | -- |
| 375.74 | 0.905 | 12.1 | -- | -- | -- | -- | -- | -0.614 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.51 | temperature | 25 | 270 | > th | dose dependent | sin | 8 | NA |
| 2 | 137.21 | temperature | 25 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 14 | 139.82 | temperature | 25 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 32 | 140.67 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 9 |
| 40 | 141.19 | temperature | 25 | 270 | > th | dose independent | sin | 6 | NA |
| 50 | 141.88 | temperature | 25 | 270 | < th | dose independent | sin | 5 | NA |
| 59 | 142.10 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 12 |
| 60 | 142.11 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 14 |
| 62 | 142.14 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 12 |
| 65 | 142.42 | temperature | 30 | 270 | < th | dose dependent | sin | 5 | NA |
| 85 | 142.89 | temperature | 10 | 270 | > th | dose dependent | sin | 6 | NA |
| 116 | 143.49 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 121 | 143.70 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 137 | 144.13 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 3 |
| 143 | 144.17 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 169 | 144.60 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 2 | 19 |
| 174 | 144.70 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 5 |
| 177 | 144.77 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 8 | 8 |
| 190 | 145.02 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 7 |
| 249 | 145.70 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 5 | 14 |
| 312 | 146.22 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 5 | 17 |
| 345 | 146.51 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 433 | 147.28 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 4 | 19 |
| 503 | 148.01 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 8 | 6 |
| 514 | 148.12 | atmosphere | 1005 | 10 | < th | dose dependent | sin | 1 | NA |
| 537 | 148.24 | wind | 9 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 545 | 148.30 | atmosphere | 1000 | 10 | < th | dose independent | sin | 0 | NA |
| 567 | 148.46 | atmosphere | 1000 | 10 | > th | dose independent | sin | 0 | NA |
| 591 | 148.64 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 9 | 2 |
| 598 | 148.69 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 7 | 23 |
| 662 | 148.98 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 20 |
| 718 | 149.24 | radiation | 40 | 270 | > th | dose dependent | rect. | 9 | 2 |
| 766 | 149.34 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 830 | 149.64 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 8 | 12 |
| 939 | 150.02 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 22 | 15 |
| 983 | 150.15 | atmosphere | 995 | 10 | > th | dose dependent | sin | 0 | NA |
| 996 | 150.22 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 20 |