Os08g0502000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0502000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.83 | 0.332 | 3.04 | -0.426 | 0.0781 | 34 | -0.356 | -104 | -0.0801 | 5.38 | 90.2 | 31 | 8.02 | 1.97 |
| 64.44 | 0.377 | 2.97 | -0.213 | 0.142 | 4.14 | -0.701 | -- | -0.112 | 6.21 | 90.2 | 31 | 8.02 | 1.97 |
| 48.8 | 0.325 | 3.05 | -0.496 | 0.0882 | 35.1 | -- | -109 | -0.0845 | 5.31 | 90.97 | 32 | 8.01 | 1.86 |
| 64.71 | 0.375 | 2.97 | -0.213 | 0.142 | 4.16 | -- | -- | -0.111 | 6.24 | 90.17 | 31 | 8.02 | 1.98 |
| 49.08 | 0.326 | 3.06 | -0.478 | -- | 36 | -- | -112 | -0.0807 | -- | 90.96 | 32 | 8 | 1.87 |
| 81.47 | 0.423 | 2.97 | -0.173 | 0.163 | -- | -0.572 | -- | -0.119 | 6.31 | -- | -- | -- | -- |
| 82.15 | 0.424 | 2.97 | -0.178 | 0.165 | -- | -- | -- | -0.116 | 7.36 | -- | -- | -- | -- |
| 65.23 | 0.376 | 2.97 | -0.211 | -- | 4.22 | -- | -- | -0.11 | -- | 90.08 | 31 | 7.98 | 1.97 |
| 64.85 | 0.375 | 2.96 | -- | 0.151 | 4.17 | -- | -- | -0.0295 | 6.55 | 87.59 | 28 | 8 | 3.54 |
| 83.6 | 0.427 | 2.98 | -0.175 | -- | -- | -- | -- | -0.113 | -- | -- | -- | -- | -- |
| 82.98 | 0.426 | 2.97 | -- | 0.164 | -- | -- | -- | -0.0962 | 7.44 | -- | -- | -- | -- |
| 64.7 | 0.375 | 2.97 | -- | -- | 4.23 | -- | -- | -0.0719 | -- | 86.97 | 21 | 7.99 | 3.49 |
| 84.41 | 0.429 | 2.97 | -- | -- | -- | -- | -- | -0.0938 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.21 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 8 | 2 |
| 3 | 52.58 | temperature | 20.0 | 30 | < th | dose independent | rect. | 6 | 2 |
| 5 | 53.22 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 14 | 53.96 | humidity | 90.0 | 30 | > th | dose independent | rect. | 8 | 2 |
| 21 | 56.15 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 6 | 2 |
| 61 | 64.09 | radiation | 1.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 150 | 67.51 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 5 |
| 165 | 67.91 | temperature | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 259 | 69.78 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 345 | 70.71 | radiation | 30.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 362 | 70.92 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 366 | 70.97 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 367 | 70.98 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 368 | 70.99 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 390 | 71.46 | wind | 1.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 423 | 71.85 | wind | 5.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 513 | 72.78 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 531 | 73.01 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 10 |
| 532 | 73.03 | wind | 1.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 548 | 73.12 | wind | 9.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 560 | 73.22 | wind | 9.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 563 | 73.22 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 568 | 73.22 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 570 | 73.22 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 573 | 73.22 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 574 | 73.22 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 582 | 73.25 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 1 |
| 584 | 73.25 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 586 | 73.26 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 589 | 73.26 | humidity | 50.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 591 | 73.26 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 593 | 73.26 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 594 | 73.28 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 600 | 73.33 | radiation | 1.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 601 | 73.33 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 1 |
| 602 | 73.33 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 632 | 73.45 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 6 | 1 |
| 634 | 73.45 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 677 | 73.69 | wind | 9.0 | 30 | < th | dose independent | rect. | 8 | 23 |
| 686 | 73.73 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 23 |
| 687 | 73.73 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 23 |
| 722 | 73.90 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 6 | 3 |
| 723 | 73.90 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 6 | 3 |
| 753 | 74.13 | temperature | 30.0 | 30 | < th | dose independent | rect. | 8 | 23 |
| 788 | 74.27 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 798 | 74.27 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 814 | 74.33 | radiation | 10.0 | 10 | < th | dose independent | sin | 11 | NA |
| 845 | 74.46 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 846 | 74.46 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 899 | 74.73 | temperature | 20.0 | 270 | > th | dose independent | sin | 7 | NA |
| 914 | 74.79 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 937 | 74.89 | temperature | 20.0 | 270 | < th | dose independent | sin | 8 | NA |
| 985 | 75.09 | wind | 3.0 | 10 | < th | dose independent | rect. | 9 | 1 |