Os08g0501700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Antihaemostatic protein domain containing protein.
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Os08g0501700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Antihaemostatic protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 197.03 | 0.66 | 3.01 | -0.408 | 0.345 | 0.315 | -0.83 | 2.42 | 0.00617 | 2.87 | 24.8 | 2825 | -- | -- |
| 200.92 | 0.66 | 2.97 | 0.196 | 0.281 | 0.416 | -1.09 | -- | 0.024 | 3.27 | 31.37 | 2282 | -- | -- |
| 198.84 | 0.657 | 3.01 | -0.461 | 0.366 | 0.298 | -- | 2.63 | -0.00876 | 2.44 | 24.8 | 2701 | -- | -- |
| 203.27 | 0.664 | 2.96 | 0.239 | 0.307 | 0.385 | -- | -- | 0.0389 | 1.99 | 31.2 | 2402 | -- | -- |
| 205.85 | 0.668 | 3.01 | -0.488 | -- | 0.19 | -- | 2.64 | -0.0331 | -- | 24.79 | 2740 | -- | -- |
| 207.17 | 0.675 | 2.95 | 0.127 | 0.292 | -- | -1.04 | -- | 0.088 | 3.04 | -- | -- | -- | -- |
| 210.32 | 0.679 | 2.95 | 0.15 | 0.292 | -- | -- | -- | 0.0948 | 1.89 | -- | -- | -- | -- |
| 209.46 | 0.674 | 2.96 | 0.248 | -- | 0.371 | -- | -- | 0.0331 | -- | 31.5 | 5066 | -- | -- |
| 204.3 | 0.666 | 2.96 | -- | 0.301 | 0.394 | -- | -- | 0.0518 | 1.88 | 31.08 | 6122 | -- | -- |
| 215.49 | 0.686 | 2.95 | 0.162 | -- | -- | -- | -- | 0.102 | -- | -- | -- | -- | -- |
| 210.91 | 0.679 | 2.96 | -- | 0.295 | -- | -- | -- | 0.0781 | 1.9 | -- | -- | -- | -- |
| 209.44 | 0.674 | 2.96 | -- | -- | 0.389 | -- | -- | 0.052 | -- | 30.98 | 6138 | -- | -- |
| 216.18 | 0.686 | 2.95 | -- | -- | -- | -- | -- | 0.0836 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 179.94 | temperature | 25.0 | 10 | < th | dose independent | rect. | 14 | 2 |
| 3 | 180.00 | temperature | 25.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 5 | 180.04 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 14 | 2 |
| 42 | 185.34 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 44 | 185.72 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 4 |
| 53 | 187.27 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 13 | 3 |
| 55 | 187.28 | humidity | 90.0 | 90 | > th | dose independent | rect. | 13 | 3 |
| 91 | 190.28 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 108 | 190.72 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 5 |
| 117 | 190.74 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 3 |
| 119 | 190.75 | radiation | 1.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 171 | 191.33 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 2 |
| 191 | 191.80 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 215 | 192.61 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 223 | 192.79 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 11 | 5 |
| 238 | 192.95 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 241 | 193.09 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 250 | 193.51 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 3 |
| 273 | 194.28 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 12 | 17 |
| 286 | 194.60 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 11 |
| 290 | 194.64 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 12 | 4 |
| 291 | 194.65 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 294 | 194.72 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 5 |
| 300 | 194.81 | temperature | 20.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 307 | 194.86 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 21 | 6 |
| 316 | 194.94 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 335 | 195.00 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 2 |
| 363 | 195.10 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 381 | 195.17 | radiation | 20.0 | 30 | < th | dose independent | rect. | 14 | 2 |
| 437 | 195.41 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 457 | 195.50 | wind | 3.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 459 | 195.51 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 470 | 195.54 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 478 | 195.57 | wind | 5.0 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 485 | 195.59 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 501 | 195.64 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 18 | 14 |
| 505 | 195.65 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 18 | 9 |
| 514 | 195.67 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 547 | 195.73 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 14 | 12 |
| 551 | 195.76 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 566 | 195.80 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 14 | 19 |
| 608 | 195.91 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 614 | 195.92 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 17 |
| 645 | 196.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 711 | 196.19 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 714 | 196.19 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 715 | 196.19 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 723 | 196.21 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 727 | 196.22 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 773 | 196.32 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 19 | 11 |
| 780 | 196.34 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 830 | 196.44 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 21 |
| 832 | 196.45 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 16 | 23 |
| 848 | 196.49 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 856 | 196.51 | wind | 5.0 | 4320 | < th | dose independent | rect. | 8 | 5 |
| 876 | 196.55 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 884 | 196.56 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 11 |
| 893 | 196.57 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 11 |
| 915 | 196.60 | wind | 5.0 | 4320 | > th | dose independent | rect. | 8 | 5 |
| 916 | 196.60 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 5 |
| 931 | 196.60 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 940 | 196.61 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 5 |
| 953 | 196.62 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 3 |
| 959 | 196.62 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 996 | 196.68 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 15 | 1 |