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Os08g0501200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0292) R2 : 0.738
β1 : -2.41 (0.107) R2dD : 0.303 R2D : 0.213
β2 : 2.05 (0.0735) R2dC : 0.447 R2C : 0.401
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.672 (0.0625) R2dN8 : 0.0894 R2N8 : 0.00481
σ : 0.55
deviance : 138.03
__
_____
C
peak time of C : 3.44
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
120.49 0.516 10.9 -2.11 2.25 -0.864 1.38 -2.8 -0.72 3.32 26.08 12 -- --
130.97 0.537 10.9 -2.56 2.18 -0.667 0.334 -- -0.81 3.33 25.51 251 -- --
124.53 0.524 10.9 -2.27 2.21 -0.806 -- -1.95 -0.752 3.29 25.65 2 -- --
130.73 0.533 10.9 -2.59 2.17 -0.706 -- -- -0.822 3.47 25.53 251 -- --
319.68 0.833 10.8 -1.75 -- 1.94 -- -1.63 -0.301 -- 45.28 28 -- --
137.66 0.55 10.9 -2.41 2.05 -- 0.349 -- -0.67 3.46 -- -- -- --
138.03 0.55 10.9 -2.41 2.05 -- -- -- -0.672 3.44 -- -- -- --
320.41 0.834 10.9 -1.96 -- 1.92 -- -- -0.364 -- 35.5 100 -- --
280.58 0.78 10.8 -- 1.93 1.49 -- -- -0.409 3.5 19.34 131 -- --
372.97 0.902 10.9 -2.33 -- -- -- -- -0.618 -- -- -- -- --
291.43 0.799 10.9 -- 2 -- -- -- -0.404 3.45 -- -- -- --
414.7 0.948 10.8 -- -- 2.57 -- -- -0.0792 -- 46.01 120 -- --
515.7 1.06 10.9 -- -- -- -- -- -0.36 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 107.04 temperature 10.0 270 > th dose dependent rect. 17 17
4 108.46 temperature 10.0 270 > th dose dependent rect. 18 15
20 110.82 temperature 10.0 270 > th dose dependent rect. 15 21
22 111.04 temperature 30.0 270 < th dose dependent rect. 21 8
28 111.47 atmosphere 1015.0 270 < th dose dependent rect. 15 7
50 112.81 temperature 20.0 30 > th dose dependent sin 8 NA
51 112.84 radiation 1.0 30 < th dose dependent sin 19 NA
97 114.01 radiation 1.0 90 > th dose independent sin 20 NA
99 114.06 radiation 1.0 90 < th dose independent sin 20 NA
102 114.12 atmosphere 1000.0 90 > th dose independent rect. 23 18
132 114.93 humidity 80.0 270 < th dose independent rect. 11 4
138 115.09 temperature 10.0 270 > th dose dependent rect. 2 9
160 115.54 atmosphere 1000.0 270 > th dose independent rect. 21 19
173 115.77 temperature 20.0 10 > th dose dependent rect. 21 15
175 115.81 temperature 30.0 30 < th dose dependent sin 9 NA
177 115.82 wind 1.0 14400 < th dose dependent rect. 9 4
182 115.91 wind 1.0 14400 < th dose independent rect. 9 4
183 115.93 atmosphere 1000.0 270 > th dose independent rect. 11 16
186 115.97 atmosphere 1015.0 10 < th dose dependent rect. 18 7
190 116.01 atmosphere 1015.0 270 < th dose independent rect. 15 7
197 116.08 temperature 20.0 30 > th dose independent rect. 18 18
218 116.38 wind 1.0 14400 > th dose independent rect. 9 4
231 116.70 temperature 25.0 270 > th dose independent rect. 16 18
237 116.80 wind 1.0 14400 > th dose independent rect. 11 2
248 116.89 humidity 90.0 14400 < th dose dependent rect. 1 2
257 117.00 atmosphere 995.0 270 > th dose dependent rect. 11 16
266 117.10 radiation 1.0 270 > th dose independent rect. 9 7
299 117.38 radiation 40.0 90 < th dose dependent sin 16 NA
305 117.46 wind 1.0 14400 < th dose independent rect. 11 2
306 117.48 atmosphere 1000.0 10 > th dose independent rect. 22 20
308 117.49 precipitation 0.1 270 < th dose independent rect. 22 17
312 117.49 precipitation 0.1 270 < th dose dependent rect. 22 17
315 117.51 wind 1.0 270 > th dose independent rect. 15 7
336 117.65 atmosphere 995.0 270 > th dose dependent rect. 11 4
338 117.67 temperature 10.0 270 > th dose independent rect. 15 7
340 117.67 temperature 10.0 270 > th dose independent rect. 22 17
348 117.73 temperature 30.0 270 < th dose dependent rect. 11 18
355 117.77 radiation 40.0 270 < th dose independent rect. 15 7
362 117.81 humidity 80.0 14400 < th dose dependent rect. 4 1
366 117.84 wind 9.0 270 < th dose independent rect. 15 7
368 117.85 radiation 1.0 270 > th dose independent rect. 11 4
370 117.85 temperature 10.0 270 > th dose dependent rect. 16 7
374 117.86 temperature 30.0 10 < th dose dependent rect. 22 8
375 117.87 atmosphere 1010.0 90 < th dose independent rect. 17 7
390 117.96 wind 9.0 270 < th dose independent rect. 22 17
402 117.99 temperature 10.0 270 > th dose dependent rect. 15 9
404 118.00 temperature 20.0 10 > th dose dependent rect. 23 13
420 118.07 atmosphere 1000.0 270 > th dose independent rect. 11 4
421 118.07 precipitation 0.1 270 < th dose independent rect. 15 7
423 118.07 atmosphere 1015.0 270 < th dose independent rect. 15 20
424 118.07 precipitation 0.1 270 < th dose dependent rect. 15 7
434 118.11 radiation 1.0 90 < th dose independent rect. 7 16
448 118.20 temperature 20.0 270 > th dose independent rect. 11 4
450 118.21 radiation 1.0 90 > th dose independent rect. 11 7
468 118.31 humidity 80.0 14400 > th dose independent rect. 2 1
472 118.32 atmosphere 1000.0 10 > th dose independent rect. 12 18
502 118.46 radiation 1.0 90 < th dose independent rect. 10 13
543 118.66 radiation 40.0 270 < th dose independent rect. 16 17
547 118.68 humidity 70.0 43200 > th dose dependent rect. 21 1
554 118.71 radiation 1.0 30 < th dose dependent rect. 6 19
555 118.72 temperature 25.0 90 < th dose independent rect. 23 8
571 118.78 temperature 20.0 270 > th dose independent rect. 3 8
598 118.90 radiation 1.0 90 < th dose dependent rect. 7 16
609 118.97 radiation 1.0 270 < th dose independent rect. 7 13
611 118.98 radiation 1.0 270 < th dose independent rect. 9 11
651 119.10 radiation 1.0 30 < th dose dependent rect. 11 14
655 119.11 humidity 80.0 14400 < th dose independent rect. 2 1
663 119.14 temperature 25.0 270 < th dose independent rect. 20 9
675 119.17 humidity 80.0 14400 < th dose dependent rect. 21 10
681 119.19 atmosphere 995.0 10 > th dose dependent rect. 12 18
686 119.21 atmosphere 1015.0 10 < th dose dependent rect. 18 18
701 119.24 radiation 40.0 270 < th dose dependent rect. 15 6
709 119.27 atmosphere 1000.0 270 > th dose independent rect. 9 7
716 119.28 radiation 1.0 30 < th dose dependent rect. 13 12
718 119.29 precipitation 0.1 270 < th dose independent rect. 11 4
723 119.29 precipitation 0.1 270 < th dose dependent rect. 11 4
733 119.31 humidity 50.0 270 > th dose independent rect. 15 7
740 119.33 radiation 1.0 90 < th dose independent rect. 15 8
748 119.34 radiation 1.0 270 < th dose independent rect. 13 7
807 119.49 temperature 30.0 10 < th dose dependent rect. 12 18
836 119.56 temperature 10.0 270 > th dose independent rect. 11 4
837 119.56 atmosphere 1015.0 270 < th dose independent rect. 11 4
839 119.56 temperature 10.0 270 > th dose independent rect. 15 20
845 119.57 temperature 25.0 90 < th dose independent sin 10 NA
860 119.61 wind 1.0 270 > th dose independent rect. 11 4
862 119.61 radiation 1.0 30 < th dose independent rect. 6 19
869 119.63 temperature 25.0 270 < th dose independent rect. 11 19
879 119.65 humidity 80.0 10 < th dose independent rect. 12 6
893 119.68 temperature 20.0 90 > th dose independent rect. 17 7
924 119.76 wind 9.0 270 < th dose independent rect. 11 4
929 119.76 humidity 90.0 270 < th dose dependent rect. 10 5
940 119.78 atmosphere 995.0 10 > th dose dependent rect. 12 6
944 119.79 temperature 20.0 270 > th dose independent rect. 10 6
950 119.80 wind 9.0 270 < th dose independent rect. 15 20
967 119.85 radiation 10.0 270 < th dose dependent rect. 15 5
973 119.87 humidity 50.0 270 > th dose independent rect. 22 17
977 119.88 humidity 80.0 14400 < th dose independent rect. 5 1
994 119.89 radiation 1.0 270 < th dose dependent rect. 9 11
998 119.91 wind 3.0 43200 < th dose dependent rect. 23 1