Os08g0500500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0500500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.36 | 0.33 | 8.21 | 1.07 | 0.14 | 0.245 | -0.0402 | 0.764 | 0.324 | 12.1 | 0.7783 | 6881 | -- | -- |
| 49.48 | 0.328 | 8.23 | 0.993 | 0.137 | 0.509 | -0.0522 | -- | 0.326 | 11.7 | 0.7341 | 7350 | -- | -- |
| 49.36 | 0.327 | 8.21 | 1.07 | 0.142 | 0.246 | -- | 0.814 | 0.324 | 12 | 0.8224 | 6799 | -- | -- |
| 49.49 | 0.328 | 8.23 | 0.988 | 0.136 | 0.516 | -- | -- | 0.327 | 11.8 | 0.7333 | 7321 | -- | -- |
| 50.59 | 0.331 | 8.21 | 1.07 | -- | 0.232 | -- | 0.859 | 0.322 | -- | 0.8154 | 6890 | -- | -- |
| 55.24 | 0.348 | 8.24 | 1.17 | 0.137 | -- | -0.0666 | -- | 0.286 | 12 | -- | -- | -- | -- |
| 55.25 | 0.348 | 8.24 | 1.17 | 0.137 | -- | -- | -- | 0.285 | 11.9 | -- | -- | -- | -- |
| 50 | 0.329 | 8.23 | 0.848 | -- | 0.506 | -- | -- | 0.315 | -- | 1.015 | 26927 | -- | -- |
| 58.92 | 0.358 | 8.21 | -- | 0.121 | 0.791 | -- | -- | 0.328 | 12.2 | 1.139 | 47274 | -- | -- |
| 56.44 | 0.351 | 8.24 | 1.17 | -- | -- | -- | -- | 0.283 | -- | -- | -- | -- | -- |
| 91.36 | 0.447 | 8.27 | -- | 0.124 | -- | -- | -- | 0.155 | 11.3 | -- | -- | -- | -- |
| 58.39 | 0.356 | 8.23 | -- | -- | 0.725 | -- | -- | 0.344 | -- | 2.332 | 47520 | -- | -- |
| 92.32 | 0.448 | 8.27 | -- | -- | -- | -- | -- | 0.154 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.86 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 2 | 47.96 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 4 | 48.20 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 8 | 48.40 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 11 | 48.54 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 14 | 48.60 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 21 | 48.70 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 23 | 48.76 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 25 | 48.82 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 26 | 48.83 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 28 | 48.83 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 37 | 48.92 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 38 | 48.92 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 48 | 49.07 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 22 | 20 |
| 59 | 49.13 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 87 | 49.28 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 10 |
| 93 | 49.30 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 6 |
| 100 | 49.33 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 17 |
| 105 | 49.35 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 17 | 11 |
| 111 | 49.37 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 5 |
| 112 | 49.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 7 |
| 114 | 49.38 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 122 | 49.40 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 124 | 49.40 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 12 |
| 133 | 49.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 134 | 49.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 135 | 49.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 186 | 49.56 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 213 | 49.61 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 12 |
| 223 | 49.62 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 14 |
| 236 | 49.65 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 259 | 49.68 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 270 | 49.71 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 274 | 49.71 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 3 |
| 281 | 49.72 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 282 | 49.72 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 285 | 49.72 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 5 |
| 290 | 49.73 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 309 | 49.75 | wind | 5.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 323 | 49.77 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 338 | 49.78 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 19 | 10 |
| 343 | 49.79 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 345 | 49.79 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 387 | 49.82 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 5 |
| 393 | 49.83 | wind | 5.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 395 | 49.83 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 456 | 49.88 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 14 | 8 |
| 482 | 49.91 | temperature | 30.0 | 720 | > th | dose independent | rect. | 8 | 6 |
| 499 | 49.91 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 18 | NA |
| 551 | 49.94 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 558 | 49.94 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 564 | 49.95 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 577 | 49.96 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 590 | 49.96 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 17 | 16 |
| 609 | 49.98 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 6 | 16 |
| 610 | 49.98 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 622 | 49.99 | temperature | 30.0 | 720 | > th | dose independent | rect. | 10 | 4 |
| 639 | 50.00 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 668 | 50.01 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 704 | 50.03 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 726 | 50.04 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 792 | 50.08 | humidity | 70.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 815 | 50.09 | humidity | 60.0 | 4320 | > th | dose dependent | sin | 18 | NA |
| 886 | 50.12 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 927 | 50.13 | temperature | 30.0 | 720 | < th | dose independent | rect. | 23 | 15 |
| 938 | 50.13 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 6 |
| 950 | 50.14 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 956 | 50.14 | temperature | 25.0 | 270 | > th | dose dependent | sin | 11 | NA |