Os08g0500400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0500400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.68 | 0.688 | 3.88 | 0.853 | 0.269 | 0.869 | 0.596 | -3.17 | -0.0355 | 5.79 | 91.37 | 214 | -- | -- |
| 224.12 | 0.697 | 3.86 | 0.797 | 0.146 | 0.822 | -0.973 | -- | -0.038 | 4.84 | 89.46 | 245 | -- | -- |
| 215.25 | 0.683 | 3.88 | 0.847 | 0.247 | 0.88 | -- | -2.71 | -0.031 | 5.95 | 91.15 | 209 | -- | -- |
| 225.47 | 0.699 | 3.86 | 0.769 | 0.173 | 0.717 | -- | -- | -0.0655 | 6.6 | 88.29 | 233 | -- | -- |
| 217.15 | 0.686 | 3.87 | 0.85 | -- | 1.02 | -- | -2.47 | 0.00723 | -- | 90.37 | 213 | -- | -- |
| 236.03 | 0.72 | 3.88 | 0.852 | 0.529 | -- | -0.427 | -- | -0.184 | 5.25 | -- | -- | -- | -- |
| 236.48 | 0.72 | 3.88 | 0.852 | 0.527 | -- | -- | -- | -0.182 | 5.35 | -- | -- | -- | -- |
| 226.49 | 0.701 | 3.86 | 0.754 | -- | 0.821 | -- | -- | -0.0495 | -- | 87.82 | 245 | -- | -- |
| 240.71 | 0.723 | 3.88 | -- | 0.117 | 0.826 | -- | -- | -0.135 | 6.82 | 87.9 | 250 | -- | -- |
| 250.97 | 0.74 | 3.89 | 0.87 | -- | -- | -- | -- | -0.169 | -- | -- | -- | -- | -- |
| 255.62 | 0.748 | 3.9 | -- | 0.542 | -- | -- | -- | -0.277 | 5.28 | -- | -- | -- | -- |
| 241.22 | 0.723 | 3.88 | -- | -- | 0.904 | -- | -- | -0.12 | -- | 87.77 | 260 | -- | -- |
| 270.94 | 0.768 | 3.91 | -- | -- | -- | -- | -- | -0.266 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 198.28 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 2 | 201.55 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 4 | 202.52 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 10 | 203.09 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 11 | 203.10 | wind | 7.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 12 | 203.15 | wind | 7.0 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 25 | 203.55 | wind | 5.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 33 | 203.88 | wind | 5.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 37 | 203.98 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 45 | 204.18 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 88 | 205.26 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 110 | 205.94 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 113 | 205.99 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 125 | 206.16 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 140 | 206.50 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 12 | 7 |
| 175 | 206.98 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 189 | 207.07 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 12 | 9 |
| 307 | 208.52 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 310 | 208.54 | wind | 3.0 | 14400 | > th | dose dependent | sin | 19 | NA |
| 320 | 208.67 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 323 | 208.68 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 8 | 9 |
| 329 | 208.76 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 337 | 208.81 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 7 |
| 347 | 208.89 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 356 | 208.98 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 385 | 209.15 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 386 | 209.15 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 390 | 209.16 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 404 | 209.20 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 418 | 209.22 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 430 | 209.26 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 438 | 209.27 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 451 | 209.30 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 479 | 209.35 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 500 | 209.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 549 | 209.60 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 1 | 16 |
| 597 | 209.77 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 613 | 209.81 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 617 | 209.83 | humidity | 70.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 655 | 209.91 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 710 | 210.01 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 13 | 17 |
| 724 | 210.04 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 728 | 210.05 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 7 | 4 |
| 755 | 210.10 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 757 | 210.11 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 22 |
| 759 | 210.12 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 776 | 210.14 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 7 | 4 |
| 800 | 210.18 | humidity | 70.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 801 | 210.18 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 809 | 210.18 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 821 | 210.20 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 824 | 210.20 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 5 | 6 |
| 848 | 210.22 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 5 | 14 |
| 879 | 210.25 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 932 | 210.30 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 13 |
| 939 | 210.31 | atmosphere | 1015.0 | 14400 | < th | dose dependent | sin | 3 | NA |