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Os08g0500200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.024) R2 : 0.0268
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.179 (0.0505) R2dN8 : 0.0346 R2N8 : 0.0268
σ : 0.451
deviance : 93.47
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
64.79 0.378 10.5 1.85 0.343 -0.631 -0.967 3.97 0.155 6.14 25.8 1361 -- --
70.39 0.391 10.6 0.803 0.355 -0.211 -0.961 -- -0.026 6.51 26.4 8897 -- --
67.04 0.381 10.5 1.84 0.34 -0.647 -- 4 0.149 5.89 26 1359 -- --
72.58 0.397 10.6 0.777 0.347 -0.192 -- -- -0.0336 6.09 26.55 8630 -- --
69.22 0.387 10.5 2.17 -- -0.891 -- 6.06 0.245 -- 25.78 1899 -- --
71.82 0.397 10.7 0.717 0.341 -- -0.975 -- -0.11 6.42 -- -- -- --
74.16 0.403 10.7 0.704 0.338 -- -- -- -0.107 6.19 -- -- -- --
77.58 0.412 10.7 0.767 -- -0.315 -- -- -0.0562 -- 22.95 9150 -- --
79.06 0.414 10.7 -- 0.34 0.406 -- -- -0.34 6.34 23.7 46808 -- --
80.07 0.418 10.7 0.713 -- -- -- -- -0.0998 -- -- -- -- --
87.21 0.437 10.7 -- 0.348 -- -- -- -0.186 6.09 -- -- -- --
84.99 0.429 10.7 -- -- 0.429 -- -- -0.339 -- 20.68 47447 -- --
93.47 0.451 10.7 -- -- -- -- -- -0.179 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 63.50 atmosphere 1000.0 10 > th dose independent rect. 5 14
3 63.93 temperature 25.0 1440 > th dose dependent rect. 6 1
4 63.98 temperature 10.0 10 > th dose dependent rect. 5 14
5 64.13 temperature 10.0 30 > th dose dependent rect. 5 18
9 64.27 temperature 25.0 1440 > th dose dependent rect. 15 2
10 64.29 radiation 1.0 10 < th dose dependent rect. 19 22
11 64.31 radiation 1.0 10 < th dose dependent sin 11 NA
15 64.52 radiation 10.0 30 < th dose independent rect. 5 5
18 64.55 wind 1.0 43200 > th dose independent rect. 7 1
26 64.75 radiation 10.0 30 < th dose independent rect. 5 14
29 64.78 wind 1.0 43200 < th dose independent rect. 7 1
31 64.79 radiation 30.0 14400 < th dose independent rect. 16 12
33 64.80 radiation 30.0 14400 < th dose independent rect. 16 7
35 64.82 radiation 1.0 10 < th dose independent rect. 19 22
37 64.83 radiation 1.0 720 < th dose dependent rect. 23 20
44 64.87 radiation 10.0 30 < th dose independent rect. 5 8
49 64.88 temperature 25.0 1440 > th dose dependent rect. 11 6
50 64.88 temperature 25.0 1440 > th dose dependent rect. 5 12
52 64.88 temperature 25.0 1440 > th dose dependent rect. 13 21
58 64.89 temperature 25.0 1440 > th dose dependent rect. 5 18
59 64.89 temperature 25.0 1440 > th dose dependent rect. 13 19
60 64.90 temperature 25.0 1440 > th dose dependent rect. 13 10
71 64.92 temperature 25.0 1440 > th dose dependent rect. 11 12
75 64.92 temperature 25.0 1440 > th dose dependent rect. 11 21
76 64.93 radiation 30.0 14400 < th dose independent rect. 16 2
77 64.93 temperature 25.0 1440 > th dose dependent sin 20 NA
148 64.98 temperature 25.0 1440 > th dose dependent rect. 20 21
175 65.01 humidity 50.0 10 > th dose dependent rect. 19 10
184 65.02 humidity 70.0 14400 < th dose independent rect. 8 1
185 65.02 wind 9.0 14400 < th dose independent rect. 13 2
231 65.05 temperature 25.0 1440 > th dose dependent no NA NA
273 65.09 wind 7.0 14400 > th dose dependent rect. 13 2
282 65.10 wind 3.0 43200 > th dose dependent rect. 13 1
289 65.11 wind 9.0 14400 > th dose independent rect. 13 2
317 65.15 humidity 80.0 14400 < th dose dependent rect. 21 12
323 65.16 radiation 30.0 30 < th dose dependent rect. 5 6
330 65.17 radiation 1.0 10 < th dose independent sin 11 NA
337 65.18 radiation 1.0 10 < th dose dependent rect. 19 19
341 65.19 radiation 1.0 10 > th dose independent sin 11 NA
348 65.20 radiation 1.0 10 < th dose dependent rect. 19 11
355 65.23 humidity 90.0 14400 > th dose independent rect. 1 3
383 65.32 precipitation 0.1 10 < th dose independent rect. 5 14
384 65.32 precipitation 0.1 10 < th dose dependent rect. 5 14
390 65.34 radiation 1.0 10 < th dose dependent rect. 19 17
392 65.35 wind 5.0 43200 < th dose independent rect. 12 3
393 65.36 atmosphere 1010.0 10 < th dose independent rect. 5 3
394 65.36 temperature 10.0 10 > th dose independent rect. 19 10
395 65.36 temperature 30.0 10 < th dose independent rect. 19 10
396 65.36 humidity 50.0 10 > th dose independent rect. 19 10
398 65.36 atmosphere 995.0 10 > th dose independent rect. 19 10
399 65.36 radiation 1.0 10 < th dose independent rect. 19 10
404 65.36 temperature 10.0 10 > th dose independent rect. 5 14
406 65.36 atmosphere 1015.0 10 < th dose independent rect. 5 14
408 65.37 wind 9.0 10 < th dose independent rect. 19 10
417 65.39 radiation 1.0 10 < th dose dependent rect. 19 13
421 65.39 radiation 1.0 90 < th dose dependent rect. 7 22
422 65.40 humidity 70.0 14400 > th dose independent rect. 7 2
423 65.40 wind 5.0 43200 > th dose independent rect. 12 3
424 65.40 humidity 90.0 14400 < th dose independent rect. 1 3
428 65.41 wind 1.0 43200 > th dose independent rect. 9 2
429 65.41 humidity 70.0 14400 < th dose independent rect. 20 13
433 65.42 radiation 1.0 10 < th dose dependent rect. 23 23
435 65.44 wind 9.0 10 < th dose independent rect. 5 14
439 65.46 wind 5.0 43200 < th dose independent rect. 13 1
492 65.54 humidity 70.0 14400 > th dose independent rect. 20 13
496 65.55 radiation 1.0 720 < th dose dependent rect. 5 14
499 65.56 radiation 40.0 14400 > th dose dependent rect. 15 18
510 65.59 wind 9.0 43200 < th dose dependent rect. 13 1
511 65.59 humidity 80.0 14400 < th dose dependent rect. 21 2
518 65.60 radiation 1.0 90 < th dose dependent rect. 13 16
520 65.61 precipitation 0.1 10 < th dose independent rect. 19 10
521 65.61 precipitation 0.1 10 < th dose dependent rect. 19 10
538 65.64 temperature 25.0 10 > th dose dependent sin 11 NA
540 65.64 wind 3.0 43200 > th dose dependent rect. 12 3
553 65.66 radiation 10.0 30 < th dose independent rect. 5 19
558 65.67 wind 1.0 43200 < th dose independent rect. 9 2
573 65.67 radiation 1.0 10 < th dose independent rect. 19 19
575 65.67 radiation 40.0 14400 > th dose dependent rect. 8 1
590 65.69 temperature 25.0 10 > th dose dependent rect. 22 10
644 65.76 radiation 1.0 4320 > th dose independent rect. 4 1
649 65.76 atmosphere 1010.0 10 < th dose independent rect. 5 5
657 65.76 radiation 1.0 4320 > th dose dependent rect. 4 1
672 65.77 humidity 80.0 14400 < th dose dependent rect. 20 8
677 65.78 wind 5.0 43200 > th dose dependent rect. 16 1
683 65.79 radiation 10.0 14400 < th dose independent rect. 19 10
694 65.81 humidity 60.0 14400 < th dose independent rect. 17 1
697 65.81 radiation 1.0 270 < th dose independent rect. 8 19
717 65.84 radiation 10.0 4320 < th dose independent rect. 4 1
721 65.84 radiation 1.0 10 < th dose independent rect. 19 17
728 65.84 temperature 25.0 10 > th dose dependent rect. 18 14
738 65.86 humidity 90.0 14400 > th dose independent rect. 2 1
755 65.87 radiation 1.0 1440 < th dose dependent rect. 15 13
760 65.88 radiation 1.0 10 < th dose independent rect. 19 13
766 65.88 radiation 1.0 1440 < th dose dependent rect. 17 11
783 65.89 atmosphere 1000.0 10 > th dose independent rect. 5 18
784 65.89 radiation 1.0 720 < th dose independent rect. 23 20
803 65.90 temperature 25.0 1440 > th dose independent rect. 16 2
804 65.90 temperature 25.0 1440 < th dose independent rect. 16 2
806 65.90 radiation 1.0 720 > th dose independent rect. 11 20
807 65.90 temperature 25.0 30 > th dose dependent rect. 6 2
810 65.90 radiation 1.0 1440 < th dose dependent rect. 15 7
815 65.90 radiation 10.0 14400 < th dose dependent rect. 19 10
820 65.91 radiation 10.0 14400 < th dose independent rect. 1 4
824 65.91 radiation 1.0 1440 < th dose dependent rect. 15 4
833 65.92 radiation 1.0 1440 < th dose dependent rect. 17 5
847 65.93 radiation 1.0 1440 < th dose dependent sin 16 NA
848 65.93 radiation 1.0 1440 < th dose dependent rect. 17 2
853 65.93 atmosphere 1015.0 4320 > th dose dependent rect. 1 7
871 65.94 radiation 10.0 14400 < th dose dependent rect. 1 4
879 65.95 temperature 25.0 1440 > th dose independent rect. 15 8
882 65.95 humidity 90.0 14400 > th dose dependent rect. 1 3
894 65.95 temperature 10.0 270 > th dose dependent rect. 2 21
900 65.96 wind 1.0 43200 < th dose dependent rect. 6 2
954 66.00 atmosphere 1015.0 4320 > th dose independent rect. 4 1
956 66.00 atmosphere 1015.0 4320 < th dose independent rect. 4 1
975 66.01 atmosphere 1015.0 4320 > th dose dependent rect. 5 1
985 66.02 temperature 25.0 1440 < th dose independent rect. 15 8
986 66.02 humidity 60.0 14400 < th dose independent rect. 17 15
988 66.02 humidity 70.0 14400 < th dose dependent rect. 7 2
996 66.03 humidity 60.0 14400 > th dose independent rect. 17 1