Os08g0497900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0497900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 181.29 | 0.633 | 7.52 | -0.062 | 0.766 | 0.488 | 1.75 | -2.42 | -0.0883 | 21.1 | 20.3 | 63 | -- | -- |
| 199.42 | 0.663 | 7.47 | 0.27 | 0.79 | 0.924 | 2.18 | -- | -0.0089 | 21.8 | 19.1 | 128 | -- | -- |
| 191.2 | 0.649 | 7.52 | -0.157 | 0.779 | 0.448 | -- | -2.67 | -0.0932 | 20.7 | 20.35 | 56 | -- | -- |
| 216.37 | 0.69 | 7.47 | 0.181 | 0.809 | 0.961 | -- | -- | -0.0142 | 21.1 | 19.1 | 128 | -- | -- |
| 224.01 | 0.697 | 7.5 | -0.13 | -- | 0.348 | -- | -2.71 | -0.0721 | -- | 20.41 | 65 | -- | -- |
| 225.05 | 0.703 | 7.44 | 0.546 | 0.67 | -- | 2.41 | -- | 0.12 | 21.6 | -- | -- | -- | -- |
| 243.47 | 0.731 | 7.44 | 0.466 | 0.721 | -- | -- | -- | 0.122 | 20.3 | -- | -- | -- | -- |
| 244.56 | 0.728 | 7.49 | -0.00339 | -- | 1.06 | -- | -- | -0.133 | -- | 19.5 | 422 | -- | -- |
| 216.97 | 0.686 | 7.48 | -- | 0.754 | 1.44 | -- | -- | -0.0145 | 20.8 | 18.45 | 95 | -- | -- |
| 272.25 | 0.771 | 7.42 | 0.462 | -- | -- | -- | -- | 0.114 | -- | -- | -- | -- | -- |
| 249.21 | 0.738 | 7.45 | -- | 0.719 | -- | -- | -- | 0.0705 | 20.3 | -- | -- | -- | -- |
| 244.02 | 0.728 | 7.47 | -- | -- | 1.16 | -- | -- | -0.0743 | -- | 19.5 | 429 | -- | -- |
| 277.87 | 0.778 | 7.43 | -- | -- | -- | -- | -- | 0.0633 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 168.22 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 5 | 171.01 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 7 | 172.20 | temperature | 20.0 | 90 | > th | dose independent | rect. | 12 | 18 |
| 8 | 172.43 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 18 |
| 38 | 177.50 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 21 | 8 |
| 49 | 178.33 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 50 | 178.43 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 58 | 178.97 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 11 | 19 |
| 65 | 179.42 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 22 |
| 75 | 179.86 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 21 |
| 79 | 180.04 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 91 | 180.55 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 116 | 181.16 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 123 | 181.49 | temperature | 20.0 | 10 | < th | dose independent | rect. | 10 | 20 |
| 135 | 181.65 | temperature | 20.0 | 90 | < th | dose independent | rect. | 10 | 22 |
| 187 | 182.62 | temperature | 20.0 | 30 | > th | dose independent | no | NA | NA |
| 189 | 182.62 | temperature | 20.0 | 90 | < th | dose independent | rect. | 18 | 23 |
| 191 | 182.63 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 13 | 17 |
| 193 | 182.65 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 7 |
| 198 | 182.77 | wind | 7.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 225 | 183.08 | temperature | 20.0 | 10 | < th | dose independent | rect. | 14 | 23 |
| 232 | 183.20 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 21 |
| 236 | 183.22 | temperature | 20.0 | 10 | < th | dose independent | rect. | 18 | 22 |
| 245 | 183.29 | temperature | 20.0 | 90 | < th | dose independent | no | NA | NA |
| 248 | 183.31 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 17 |
| 279 | 183.45 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 282 | 183.45 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 283 | 183.45 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 10 | 3 |
| 285 | 183.47 | temperature | 20.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 288 | 183.49 | temperature | 20.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 291 | 183.51 | temperature | 20.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 294 | 183.56 | temperature | 20.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 296 | 183.58 | temperature | 20.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 324 | 183.89 | temperature | 20.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 333 | 184.01 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 19 |
| 352 | 184.26 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 15 |
| 363 | 184.44 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 21 |
| 372 | 184.53 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 5 |
| 416 | 185.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 417 | 185.02 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 418 | 185.02 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 423 | 185.07 | temperature | 20.0 | 10 | < th | dose independent | rect. | 18 | 19 |
| 424 | 185.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 6 |
| 427 | 185.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 6 |
| 436 | 185.14 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 440 | 185.20 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 442 | 185.21 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 450 | 185.28 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 512 | 185.63 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 538 | 185.79 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 560 | 185.91 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 8 |
| 587 | 186.00 | temperature | 20.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 626 | 186.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 17 |
| 628 | 186.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 17 |
| 633 | 186.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 18 |
| 637 | 186.37 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 648 | 186.43 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 17 |
| 671 | 186.56 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 699 | 186.70 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 707 | 186.72 | wind | 7.0 | 270 | < th | dose independent | rect. | 18 | 17 |
| 727 | 186.85 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 728 | 186.85 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 16 |
| 742 | 186.92 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 760 | 187.03 | temperature | 20.0 | 30 | > th | dose independent | sin | 16 | NA |
| 796 | 187.24 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 815 | 187.36 | temperature | 10.0 | 270 | > th | dose dependent | no | NA | NA |
| 824 | 187.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 19 |
| 826 | 187.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 19 |
| 831 | 187.43 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 863 | 187.49 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 20 |
| 871 | 187.51 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 899 | 187.63 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 18 |
| 906 | 187.69 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 918 | 187.77 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 924 | 187.80 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 982 | 188.04 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 999 | 188.09 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 19 |