Os08g0495500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : TRAF-like domain containing protein.
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Os08g0495500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : TRAF-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.3 | 0.536 | 11.8 | 1.99 | 0.518 | -1.78 | 0.196 | -2.03 | 0.65 | 12.5 | 7.924 | 84 | -- | -- |
| 133.92 | 0.539 | 11.8 | 1.97 | 0.532 | -1.68 | -0.77 | -- | 0.649 | 12.3 | 5.38 | 80 | -- | -- |
| 130.17 | 0.531 | 11.8 | 1.99 | 0.519 | -1.77 | -- | -1.83 | 0.649 | 12.4 | 7.75 | 80 | -- | -- |
| 136.49 | 0.544 | 11.8 | 1.94 | 0.523 | -1.67 | -- | -- | 0.645 | 12.4 | 5.429 | 81 | -- | -- |
| 136.87 | 0.545 | 11.8 | 1.96 | -- | -1.36 | -- | -1.86 | 0.637 | -- | 15.1 | 95 | -- | -- |
| 173.2 | 0.617 | 11.8 | 1.96 | 0.335 | -- | 0.716 | -- | 0.579 | 0.663 | -- | -- | -- | -- |
| 175.28 | 0.62 | 11.8 | 1.94 | 0.338 | -- | -- | -- | 0.574 | 1.18 | -- | -- | -- | -- |
| 142.59 | 0.556 | 11.8 | 1.93 | -- | -1.22 | -- | -- | 0.635 | -- | 13.06 | 113 | -- | -- |
| 235.67 | 0.715 | 11.8 | -- | 0.496 | -1.67 | -- | -- | 0.428 | 12.1 | 5.153 | 80 | -- | -- |
| 182.33 | 0.631 | 11.8 | 1.95 | -- | -- | -- | -- | 0.581 | -- | -- | -- | -- | -- |
| 274.13 | 0.775 | 11.8 | -- | 0.371 | -- | -- | -- | 0.359 | 1.39 | -- | -- | -- | -- |
| 240.07 | 0.722 | 11.8 | -- | -- | -1.41 | -- | -- | 0.423 | -- | 22.18 | 113 | -- | -- |
| 282.6 | 0.785 | 11.8 | -- | -- | -- | -- | -- | 0.365 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.92 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 3 | 118.61 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 15 |
| 21 | 122.96 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 8 |
| 25 | 124.22 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 28 | 124.38 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 38 | 125.03 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 41 | 125.37 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 53 | 126.00 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 9 |
| 59 | 126.25 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 12 |
| 62 | 126.33 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 20 |
| 70 | 126.75 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 22 |
| 75 | 126.87 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 108 | 127.58 | humidity | 60.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 110 | 127.66 | radiation | 40.0 | 90 | < th | dose dependent | sin | 1 | NA |
| 118 | 127.89 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 131 | 127.92 | radiation | 1.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 140 | 128.17 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 169 | 128.49 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 173 | 128.59 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 178 | 128.67 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 182 | 128.71 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 183 | 128.72 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 222 | 129.20 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 12 |
| 232 | 129.34 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 9 |
| 234 | 129.34 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 241 | 129.45 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 244 | 129.48 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 255 | 129.65 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 18 |
| 256 | 129.65 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 257 | 129.66 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 7 |
| 317 | 130.05 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 5 |
| 340 | 130.26 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 356 | 130.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 361 | 130.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 362 | 130.34 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 366 | 130.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 369 | 130.41 | radiation | 10.0 | 90 | > th | dose independent | rect. | 8 | 8 |
| 378 | 130.52 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 415 | 130.77 | radiation | 10.0 | 90 | > th | dose dependent | no | NA | NA |
| 496 | 130.84 | radiation | 30.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 502 | 130.91 | radiation | 10.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 505 | 130.93 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 523 | 131.07 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 537 | 131.21 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 545 | 131.29 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 546 | 131.29 | radiation | 1.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 577 | 131.52 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 578 | 131.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 580 | 131.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 581 | 131.52 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 584 | 131.52 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 585 | 131.52 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 590 | 131.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 22 |
| 592 | 131.53 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 610 | 131.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 15 |
| 611 | 131.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 635 | 131.69 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 638 | 131.70 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 654 | 131.73 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 662 | 131.81 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 22 |
| 663 | 131.81 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 22 |
| 664 | 131.82 | radiation | 10.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 694 | 131.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 2 |
| 696 | 131.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 700 | 131.95 | radiation | 1.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 705 | 132.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 7 |
| 708 | 132.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 710 | 132.02 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 731 | 132.24 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 735 | 132.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 736 | 132.29 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 737 | 132.29 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 7 |
| 739 | 132.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 758 | 132.35 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 761 | 132.35 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 762 | 132.35 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 763 | 132.35 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 785 | 132.47 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 787 | 132.51 | radiation | 20.0 | 90 | < th | dose independent | sin | 1 | NA |
| 788 | 132.53 | wind | 9.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 789 | 132.53 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 792 | 132.53 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 793 | 132.53 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 794 | 132.53 | temperature | 10.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 807 | 132.57 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 23 |
| 874 | 132.72 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 5 |
| 875 | 132.72 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 881 | 132.76 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 887 | 132.84 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 895 | 132.91 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 916 | 133.07 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 931 | 133.20 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 933 | 133.22 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 995 | 133.49 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 19 |
| 996 | 133.49 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 998 | 133.50 | radiation | 40.0 | 10 | < th | dose dependent | sin | 22 | NA |