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Os08g0493900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : WD40-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.86 (0.0241) R2 : 0.195
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.656 (0.0631) R2dC : 0.192 R2C : 0.187
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0946 (0.0508) R2dN8 : 0.00791 R2N8 : 0.00375
σ : 0.455
deviance : 94.75
__
_____
C
peak time of C : 17.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
67.65 0.386 8.84 0.658 0.594 1.02 0.921 0.383 0.204 17.4 77.64 1355 -- --
67.54 0.383 8.83 0.7 0.591 0.991 0.951 -- 0.225 17.5 76 1335 -- --
69.42 0.388 8.83 0.64 0.593 0.979 -- 0.568 0.213 17.7 76.27 1333 -- --
69.74 0.389 8.83 0.701 0.597 1.01 -- -- 0.23 17.7 76.61 1332 -- --
87.43 0.436 8.82 0.633 -- 1.12 -- 0.616 0.206 -- 77 1314 -- --
81.8 0.424 8.85 0.617 0.658 -- 1.09 -- 0.158 17.2 -- -- -- --
84.73 0.431 8.84 0.617 0.667 -- -- -- 0.163 17.3 -- -- -- --
87.83 0.436 8.82 0.684 -- 1.2 -- -- 0.21 -- 77.16 1318 -- --
81.21 0.42 8.84 -- 0.625 0.976 -- -- 0.196 17.8 77 2758 -- --
107.92 0.485 8.83 0.594 -- -- -- -- 0.147 -- -- -- -- --
94.75 0.455 8.86 -- 0.656 -- -- -- 0.0946 17.4 -- -- -- --
99.21 0.464 8.83 -- -- 1.07 -- -- 0.166 -- 77.23 2738 -- --
117.22 0.505 8.85 -- -- -- -- -- 0.0809 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 62.02 humidity 50.0 270 > th dose dependent rect. 18 8
3 62.42 radiation 1.0 270 < th dose dependent rect. 5 22
6 63.26 radiation 40.0 90 < th dose independent rect. 3 16
7 63.26 radiation 1.0 270 < th dose dependent rect. 17 10
8 63.31 radiation 30.0 90 < th dose independent rect. 3 6
9 63.33 radiation 30.0 90 < th dose independent rect. 3 8
10 63.34 precipitation 0.1 270 < th dose independent rect. 3 15
11 63.34 precipitation 0.1 270 < th dose dependent rect. 3 15
23 63.81 temperature 10.0 90 > th dose dependent rect. 8 7
26 63.86 radiation 1.0 270 < th dose independent rect. 18 9
27 63.87 precipitation 0.1 90 < th dose independent rect. 3 6
29 63.87 precipitation 0.1 90 < th dose dependent rect. 3 6
33 63.96 precipitation 0.1 270 < th dose independent rect. 14 17
35 63.96 precipitation 0.1 270 < th dose dependent rect. 14 17
40 64.01 atmosphere 995.0 270 > th dose independent rect. 18 9
42 64.02 radiation 40.0 10 < th dose independent rect. 4 16
47 64.11 wind 9.0 90 < th dose independent rect. 9 18
48 64.12 radiation 30.0 90 < th dose independent rect. 15 18
50 64.16 temperature 30.0 90 < th dose independent rect. 3 6
53 64.19 humidity 60.0 270 > th dose independent rect. 18 9
56 64.23 temperature 10.0 270 > th dose independent rect. 18 9
58 64.23 radiation 20.0 270 < th dose independent rect. 18 9
61 64.23 temperature 10.0 270 > th dose independent rect. 3 15
62 64.23 atmosphere 1015.0 270 < th dose independent rect. 3 15
64 64.25 wind 9.0 270 < th dose independent rect. 18 9
66 64.26 wind 9.0 270 < th dose dependent rect. 8 17
73 64.39 wind 9.0 90 < th dose dependent rect. 3 6
75 64.42 temperature 30.0 270 < th dose independent rect. 18 9
79 64.45 temperature 10.0 90 > th dose dependent rect. 3 5
82 64.49 wind 9.0 270 < th dose dependent rect. 7 7
83 64.51 wind 7.0 90 < th dose independent rect. 3 6
84 64.51 humidity 60.0 90 > th dose independent rect. 3 6
85 64.51 precipitation 0.1 270 < th dose independent rect. 1 7
86 64.51 precipitation 0.1 270 < th dose dependent rect. 1 7
87 64.52 wind 7.0 270 < th dose independent rect. 7 7
96 64.60 temperature 10.0 90 > th dose independent rect. 3 6
99 64.60 atmosphere 995.0 90 > th dose independent rect. 3 6
100 64.60 atmosphere 1015.0 90 < th dose independent rect. 3 6
101 64.60 temperature 10.0 90 > th dose independent rect. 9 18
103 64.61 wind 7.0 270 < th dose independent rect. 7 19
108 64.64 precipitation 0.1 270 < th dose independent rect. 3 3
110 64.64 precipitation 0.1 270 < th dose dependent rect. 3 3
113 64.68 radiation 20.0 270 < th dose independent rect. 1 7
119 64.74 radiation 30.0 90 < th dose independent rect. 13 20
120 64.75 precipitation 0.1 90 < th dose independent rect. 8 7
123 64.75 precipitation 0.1 90 < th dose dependent rect. 8 7
128 64.77 temperature 15.0 90 > th dose independent rect. 8 7
131 64.81 temperature 10.0 10 > th dose dependent rect. 9 7
133 64.82 precipitation 0.1 10 < th dose independent rect. 16 17
136 64.82 precipitation 0.1 10 < th dose dependent rect. 16 17
141 64.84 temperature 15.0 90 > th dose independent rect. 15 17
143 64.85 atmosphere 1015.0 90 < th dose independent rect. 8 7
153 64.89 wind 9.0 270 < th dose independent rect. 6 21
165 64.98 wind 5.0 270 < th dose independent rect. 3 3
166 64.98 wind 5.0 270 < th dose independent rect. 1 7
167 64.99 radiation 1.0 90 > th dose independent sin 12 NA
171 65.00 radiation 1.0 90 > th dose independent rect. 8 7
173 65.01 atmosphere 995.0 90 > th dose independent rect. 8 7
175 65.01 temperature 10.0 10 > th dose dependent rect. 4 5
178 65.04 radiation 1.0 90 > th dose independent rect. 15 17
182 65.08 wind 9.0 10 < th dose independent rect. 9 19
183 65.08 radiation 1.0 90 < th dose dependent sin 12 NA
194 65.10 atmosphere 995.0 90 > th dose independent rect. 9 18
218 65.18 precipitation 0.1 10 < th dose independent rect. 3 6
219 65.18 precipitation 0.1 10 < th dose dependent rect. 3 6
227 65.25 wind 9.0 270 < th dose dependent rect. 3 3
229 65.27 wind 9.0 10 < th dose independent rect. 9 7
239 65.30 wind 9.0 10 < th dose dependent rect. 4 5
246 65.32 wind 9.0 270 < th dose independent rect. 3 15
250 65.34 wind 9.0 90 < th dose independent rect. 15 17
251 65.34 temperature 10.0 270 > th dose dependent rect. 3 3
261 65.39 atmosphere 1010.0 270 < th dose independent rect. 3 3
264 65.40 wind 7.0 10 < th dose independent rect. 4 5
268 65.42 temperature 10.0 270 > th dose independent rect. 1 7
270 65.42 temperature 30.0 270 < th dose independent rect. 1 7
271 65.42 humidity 50.0 270 > th dose independent rect. 1 7
273 65.42 atmosphere 995.0 270 > th dose independent rect. 1 7
274 65.42 atmosphere 1015.0 270 < th dose independent rect. 1 7
286 65.43 humidity 90.0 90 < th dose independent rect. 8 7
292 65.44 temperature 15.0 10 > th dose independent rect. 16 17
302 65.46 temperature 10.0 10 > th dose independent rect. 4 5
304 65.46 temperature 30.0 10 < th dose independent rect. 4 5
305 65.46 humidity 50.0 10 > th dose independent rect. 4 5
307 65.46 atmosphere 995.0 10 > th dose independent rect. 4 5
308 65.46 atmosphere 1015.0 10 < th dose independent rect. 4 5
310 65.46 temperature 10.0 10 > th dose independent rect. 9 19
313 65.46 radiation 40.0 90 < th dose dependent rect. 4 15
316 65.47 precipitation 0.1 90 < th dose independent rect. 9 18
318 65.47 precipitation 0.1 90 < th dose dependent rect. 9 18
325 65.49 temperature 10.0 10 > th dose independent rect. 9 7
327 65.49 atmosphere 1015.0 10 < th dose independent rect. 9 7
328 65.49 precipitation 0.1 10 < th dose independent rect. 9 7
331 65.49 precipitation 0.1 10 < th dose dependent rect. 9 7
373 65.56 temperature 10.0 270 > th dose independent rect. 3 3
375 65.56 temperature 30.0 270 < th dose independent rect. 3 3
376 65.56 humidity 50.0 270 > th dose independent rect. 3 3
379 65.56 atmosphere 995.0 270 > th dose independent rect. 3 3
381 65.56 radiation 20.0 270 < th dose independent rect. 3 3
384 65.56 temperature 10.0 270 > th dose independent rect. 6 21
388 65.57 atmosphere 995.0 10 > th dose independent rect. 9 7
389 65.57 radiation 40.0 270 < th dose dependent rect. 2 6
405 65.62 atmosphere 995.0 10 > th dose independent rect. 9 19
420 65.64 wind 1.0 90 > th dose independent rect. 8 7
427 65.65 radiation 1.0 90 > th dose dependent rect. 8 7
428 65.65 radiation 40.0 10 < th dose dependent rect. 4 16
436 65.68 radiation 40.0 270 < th dose dependent rect. 3 3
450 65.71 radiation 1.0 10 > th dose independent rect. 9 7
453 65.72 radiation 30.0 90 < th dose independent rect. 13 22
479 65.75 radiation 40.0 10 < th dose independent rect. 16 17
480 65.75 radiation 1.0 270 < th dose independent rect. 5 22
491 65.78 wind 9.0 10 < th dose independent rect. 16 17
527 65.87 radiation 1.0 10 > th dose dependent rect. 9 7
532 65.89 humidity 60.0 720 > th dose dependent rect. 18 1
542 65.91 radiation 1.0 270 > th dose independent rect. 13 18
571 66.00 radiation 1.0 90 < th dose independent sin 12 NA
590 66.03 precipitation 0.1 270 < th dose independent rect. 18 9
593 66.03 precipitation 0.1 270 < th dose dependent rect. 18 9
618 66.09 atmosphere 995.0 270 > th dose independent rect. 6 21
619 66.10 temperature 25.0 270 < th dose independent rect. 4 1
681 66.22 temperature 10.0 270 > th dose dependent rect. 1 7
685 66.24 atmosphere 1015.0 90 < th dose independent rect. 9 18
753 66.32 humidity 90.0 720 < th dose dependent rect. 18 14
773 66.34 atmosphere 995.0 90 > th dose independent rect. 15 17
853 66.44 precipitation 0.1 10 < th dose independent rect. 9 18
858 66.44 precipitation 0.1 10 < th dose dependent rect. 9 18
907 66.51 humidity 50.0 270 > th dose independent rect. 7 6
914 66.53 humidity 90.0 10 < th dose independent rect. 9 7
960 66.58 humidity 90.0 720 < th dose dependent rect. 20 1
966 66.59 radiation 1.0 270 > th dose dependent rect. 8 4
979 66.61 atmosphere 995.0 10 > th dose independent rect. 16 17
990 66.62 temperature 10.0 90 > th dose dependent rect. 15 17