Os08g0492100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Paraneoplastic encephalomyelitis antigen family protein.
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Os08g0492100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Paraneoplastic encephalomyelitis antigen family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.45 | 0.251 | 11.6 | 0.541 | 0.0836 | -1.04 | 0.569 | -0.436 | 0.212 | 19.1 | 21.08 | 10 | -- | -- |
| 28.46 | 0.25 | 11.5 | 0.608 | 0.0829 | -1.06 | 0.531 | -- | 0.229 | 19.9 | 21.1 | 7 | -- | -- |
| 29 | 0.253 | 11.6 | 0.5 | 0.0923 | -0.98 | -- | -0.499 | 0.196 | 22 | 21.08 | 10 | -- | -- |
| 29.22 | 0.253 | 11.6 | 0.583 | 0.0885 | -1.02 | -- | -- | 0.221 | 21.8 | 21.1 | 7 | -- | -- |
| 29.46 | 0.254 | 11.6 | 0.512 | -- | -1.03 | -- | -0.48 | 0.204 | -- | 20.95 | 7 | -- | -- |
| 44.46 | 0.313 | 11.6 | 0.388 | 0.418 | -- | 0.292 | -- | 0.0556 | 1.53 | -- | -- | -- | -- |
| 44.79 | 0.313 | 11.6 | 0.378 | 0.419 | -- | -- | -- | 0.0537 | 1.67 | -- | -- | -- | -- |
| 29.66 | 0.255 | 11.5 | 0.591 | -- | -1.05 | -- | -- | 0.227 | -- | 21.1 | 6 | -- | -- |
| 37.55 | 0.287 | 11.6 | -- | 0.14 | -0.821 | -- | -- | 0.127 | 24 | 21.53 | 5 | -- | -- |
| 55.5 | 0.348 | 11.6 | 0.395 | -- | -- | -- | -- | 0.063 | -- | -- | -- | -- | -- |
| 48.55 | 0.326 | 11.6 | -- | 0.426 | -- | -- | -- | 0.0116 | 1.7 | -- | -- | -- | -- |
| 38.5 | 0.29 | 11.6 | -- | -- | -0.929 | -- | -- | 0.143 | -- | 21.44 | 5 | -- | -- |
| 59.62 | 0.36 | 11.6 | -- | -- | -- | -- | -- | 0.0192 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.60 | temperature | 20 | 30 | > th | dose dependent | rect. | 7 | 22 |
| 28 | 28.76 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 42 | 29.20 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 21 |
| 44 | 29.22 | temperature | 25 | 90 | > th | dose independent | rect. | 8 | 20 |
| 61 | 29.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 67 | 29.49 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 74 | 29.58 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 77 | 29.63 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 82 | 29.65 | temperature | 20 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 85 | 29.68 | temperature | 20 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 92 | 29.72 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 96 | 29.74 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 97 | 29.75 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 116 | 29.85 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 119 | 29.86 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 120 | 29.87 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 23 |
| 122 | 29.88 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 131 | 29.95 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 23 |
| 138 | 29.99 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 143 | 30.03 | temperature | 25 | 270 | > th | dose independent | no | NA | NA |
| 146 | 30.05 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 23 |
| 148 | 30.08 | temperature | 25 | 270 | > th | dose independent | rect. | 20 | 23 |
| 155 | 30.11 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 167 | 30.17 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 23 |
| 172 | 30.17 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 178 | 30.19 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 23 |
| 190 | 30.27 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 23 |
| 198 | 30.32 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 202 | 30.33 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 233 | 30.53 | temperature | 25 | 270 | < th | dose independent | no | NA | NA |
| 255 | 30.64 | temperature | 20 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 305 | 30.84 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 23 |
| 345 | 31.01 | temperature | 25 | 270 | > th | dose independent | rect. | 11 | 23 |
| 355 | 31.05 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 18 |
| 369 | 31.12 | temperature | 30 | 10 | < th | dose dependent | sin | 22 | NA |
| 380 | 31.16 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 403 | 31.23 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 420 | 31.30 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 425 | 31.32 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 431 | 31.35 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 437 | 31.37 | temperature | 25 | 30 | < th | dose independent | rect. | 5 | 21 |
| 456 | 31.43 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 520 | 31.62 | temperature | 20 | 10 | > th | dose dependent | sin | 22 | NA |
| 569 | 31.78 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 585 | 31.83 | temperature | 25 | 30 | > th | dose independent | sin | 21 | NA |
| 627 | 31.93 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 641 | 31.97 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 16 |
| 666 | 32.02 | temperature | 25 | 10 | < th | dose independent | sin | 20 | NA |
| 783 | 32.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 979 | 32.69 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 997 | 32.71 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 14 |