Os08g0488800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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Os08g0488800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.81 | 0.277 | 11.9 | 0.619 | 1.4 | -0.948 | 0.999 | 0.943 | 0.21 | 5.49 | 26.63 | 216 | -- | -- |
| 34.93 | 0.275 | 12 | 0.531 | 1.4 | -0.865 | 0.912 | -- | 0.195 | 5.51 | 26.5 | 204 | -- | -- |
| 36.95 | 0.283 | 12 | 0.499 | 1.39 | -0.86 | -- | -0.391 | 0.196 | 5.53 | 26.32 | 195 | -- | -- |
| 36.92 | 0.283 | 12 | 0.544 | 1.39 | -0.928 | -- | -- | 0.192 | 5.52 | 26.58 | 203 | -- | -- |
| 98.56 | 0.462 | 11.9 | 1.17 | -- | -1.93 | -- | 3.59 | 0.449 | -- | 24.96 | 303 | -- | -- |
| 46.48 | 0.32 | 12 | 0.41 | 1.72 | -- | 1.32 | -- | 0.179 | 5.33 | -- | -- | -- | -- |
| 50.82 | 0.334 | 12 | 0.412 | 1.72 | -- | -- | -- | 0.173 | 5.33 | -- | -- | -- | -- |
| 94.64 | 0.453 | 11.9 | 0.778 | -- | -1.98 | -- | -- | 0.366 | -- | 24.79 | 304 | -- | -- |
| 44.4 | 0.31 | 12 | -- | 1.44 | -0.81 | -- | -- | 0.129 | 5.47 | 26.76 | 203 | -- | -- |
| 205.73 | 0.67 | 12 | 0.471 | -- | -- | -- | -- | 0.215 | -- | -- | -- | -- | -- |
| 55.29 | 0.348 | 12 | -- | 1.73 | -- | -- | -- | 0.127 | 5.32 | -- | -- | -- | -- |
| 110.13 | 0.489 | 12 | -- | -- | -1.87 | -- | -- | 0.267 | -- | 24.9 | 294 | -- | -- |
| 211.58 | 0.679 | 12 | -- | -- | -- | -- | -- | 0.163 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.02 | temperature | 30 | 270 | < th | dose independent | rect. | 8 | 13 |
| 3 | 33.49 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 21 |
| 9 | 33.98 | temperature | 25 | 270 | > th | dose dependent | rect. | 6 | 11 |
| 31 | 34.24 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 12 |
| 32 | 34.26 | temperature | 30 | 90 | < th | dose independent | rect. | 10 | 13 |
| 45 | 34.67 | temperature | 25 | 270 | > th | dose dependent | sin | 23 | NA |
| 61 | 34.85 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 5 |
| 141 | 35.62 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 164 | 35.71 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 3 |
| 201 | 35.90 | temperature | 30 | 270 | < th | dose independent | rect. | 1 | 22 |
| 214 | 35.94 | humidity | 50 | 270 | > th | dose independent | rect. | 15 | 22 |
| 221 | 35.96 | temperature | 25 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 226 | 35.98 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 13 |
| 272 | 36.11 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 298 | 36.22 | humidity | 50 | 270 | > th | dose independent | rect. | 8 | 13 |
| 328 | 36.35 | humidity | 50 | 270 | > th | dose independent | rect. | 16 | 20 |
| 337 | 36.39 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 23 |
| 353 | 36.46 | temperature | 30 | 90 | < th | dose dependent | rect. | 10 | 13 |
| 363 | 36.50 | temperature | 30 | 270 | < th | dose independent | sin | 21 | NA |
| 394 | 36.61 | wind | 7 | 270 | < th | dose independent | rect. | 12 | 5 |
| 395 | 36.61 | radiation | 40 | 270 | < th | dose independent | rect. | 17 | 21 |
| 400 | 36.62 | temperature | 30 | 270 | > th | dose independent | sin | 22 | NA |
| 401 | 36.62 | temperature | 30 | 270 | > th | dose independent | rect. | 12 | 23 |
| 404 | 36.63 | temperature | 30 | 270 | > th | dose independent | rect. | 9 | 9 |
| 410 | 36.63 | radiation | 40 | 270 | < th | dose independent | rect. | 8 | 14 |
| 449 | 36.69 | temperature | 30 | 270 | > th | dose independent | rect. | 13 | 3 |
| 453 | 36.70 | humidity | 70 | 90 | > th | dose independent | rect. | 10 | 13 |
| 457 | 36.71 | temperature | 30 | 270 | < th | dose independent | no | NA | NA |
| 459 | 36.71 | temperature | 15 | 270 | > th | dose independent | rect. | 17 | 19 |
| 480 | 36.74 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 3 |
| 497 | 36.78 | temperature | 30 | 270 | > th | dose independent | rect. | 12 | 5 |
| 552 | 36.88 | temperature | 30 | 270 | > th | dose independent | no | NA | NA |
| 700 | 37.02 | wind | 1 | 270 | > th | dose independent | rect. | 12 | 5 |
| 718 | 37.06 | radiation | 1 | 270 | > th | dose dependent | rect. | 12 | 21 |
| 725 | 37.08 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 18 |
| 743 | 37.10 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 21 |
| 762 | 37.16 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 6 |
| 800 | 37.20 | radiation | 10 | 270 | > th | dose independent | rect. | 12 | 20 |
| 803 | 37.21 | temperature | 15 | 270 | > th | dose independent | rect. | 8 | 13 |
| 809 | 37.21 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 13 |
| 833 | 37.28 | temperature | 30 | 720 | < th | dose independent | rect. | 2 | 10 |
| 880 | 37.38 | temperature | 30 | 270 | < th | dose independent | rect. | 4 | 23 |
| 928 | 37.43 | radiation | 10 | 90 | < th | dose dependent | sin | 14 | NA |
| 945 | 37.45 | humidity | 90 | 270 | < th | dose dependent | rect. | 12 | 5 |
| 965 | 37.50 | radiation | 10 | 270 | > th | dose dependent | sin | 13 | NA |
| 974 | 37.51 | temperature | 15 | 270 | > th | dose independent | rect. | 16 | 21 |
| 985 | 37.53 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 5 |
| 1000 | 37.55 | humidity | 50 | 90 | > th | dose dependent | rect. | 10 | 13 |