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Os08g0487800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Heat-shock protein precursor.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0237) R2 : 0.805
β1 : 0.958 (0.0869) R2dD : 0.0546 R2D : 0.0604
β2 : 2.27 (0.0618) R2dC : 0.582 R2C : 0.574
β3 : 1.73 (0.0894) R2dE : 0.161 R2E : 0.17
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0455 (0.0506) R2dN8 : 0.000448 R2N8 : 0.000134
σ : 0.442
deviance : 90.23
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C
peak time of C : 17.8
E
wheather : temperature
threshold : 20.34
memory length : 240
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 7.03
open length of G : 4.4

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
89.65 0.445 11.3 0.964 2.27 1.72 0.494 -0.00652 -0.0512 17.8 20.12 259 7.03 4.18
89.65 0.441 11.3 0.973 2.27 1.72 0.484 -- -0.0478 17.8 20.14 255 7.03 4.22
90.24 0.442 11.3 0.965 2.27 1.72 -- 0.0157 -0.0464 17.8 20.2 254 7.03 4.23
90.23 0.442 11.3 0.958 2.27 1.73 -- -- -0.0455 17.8 20.34 240 7.03 4.4
114.6 0.499 11.2 0.897 -- 2.32 -- 0.468 -0.0756 -- 4.959 846 7.06 4.62
130.57 0.536 11.2 1.11 2.37 -- 0.644 -- 0.00312 16.6 -- -- -- --
131.67 0.537 11.2 1.11 2.38 -- -- -- 0.00647 16.6 -- -- -- --
114.07 0.497 11.2 0.873 -- 2.39 -- -- -0.0716 -- 3.26 849 7.02 5.23
113.64 0.497 11.3 -- 2.23 1.87 -- -- -0.148 17.9 20.73 175 7.1 5.53
432.31 0.972 11.2 1.02 -- -- -- -- -0.0559 -- -- -- -- --
164.33 0.6 11.3 -- 2.36 -- -- -- -0.118 16.6 -- -- -- --
131.47 0.534 11.3 -- -- 2.46 -- -- -0.206 -- 8.594 856 6.95 5.12
459.86 1 11.3 -- -- -- -- -- -0.169 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 89.75 temperature 20 270 > th dose dependent rect. 7 4
2 90.70 temperature 20 90 > th dose dependent rect. 7 7
4 91.11 temperature 30 90 < th dose dependent rect. 4 15
5 91.26 temperature 30 90 < th dose dependent rect. 4 13
21 92.73 temperature 20 10 > th dose dependent rect. 8 7
31 93.36 temperature 25 90 > th dose dependent sin 5 NA
42 93.65 temperature 20 270 > th dose dependent rect. 9 1
70 94.88 temperature 30 30 < th dose dependent sin 1 NA
109 96.40 temperature 10 90 > th dose dependent sin 2 NA
129 96.71 temperature 25 270 > th dose independent rect. 7 4
165 97.24 temperature 25 90 > th dose dependent rect. 20 18
186 97.49 temperature 10 90 > th dose dependent rect. 8 19
190 97.59 temperature 25 90 > th dose dependent rect. 24 14
202 97.69 temperature 25 90 > th dose dependent rect. 2 12
256 98.35 temperature 25 10 > th dose independent rect. 9 5
325 99.25 temperature 25 270 > th dose independent rect. 9 1
344 99.38 temperature 20 10 > th dose dependent rect. 9 3
434 100.14 temperature 25 270 < th dose independent rect. 2 12
607 101.95 radiation 40 270 < th dose independent rect. 10 21
633 102.25 temperature 25 90 < th dose independent rect. 4 15
653 102.47 temperature 25 10 > th dose independent rect. 9 9
691 102.85 radiation 20 270 < th dose dependent rect. 2 12
765 103.51 wind 7 270 < th dose independent rect. 6 21
823 103.89 radiation 1 270 < th dose dependent rect. 3 10
832 103.93 radiation 10 270 > th dose independent sin 5 NA
842 104.01 temperature 20 10 > th dose dependent rect. 8 13
895 104.22 radiation 1 270 < th dose independent rect. 3 10
910 104.26 humidity 60 90 > th dose dependent rect. 4 15
923 104.31 temperature 25 90 < th dose independent rect. 4 17