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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0487100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to BZIP transcription factor BZI-2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.33 (0.0242) R2 : 0.000131
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0124 (0.051) R2dN8 : 0.000169 R2N8 : 0.000131
σ : 0.456
deviance : 95.57
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
89.99 0.446 3.33 0.166 0.216 -0.119 -0.323 -1.2 0.018 5.58 70.51 4941 -- --
91.44 0.445 3.33 0.104 0.221 -0.209 -0.485 -- -0.0473 5.75 84.73 7631 -- --
90.22 0.442 3.33 0.17 0.214 -0.111 -- -1.28 0.0221 5.86 70.76 4937 -- --
91.75 0.446 3.35 0.138 0.207 -0.265 -- -- -0.0964 5.66 85.7 7307 -- --
92.43 0.448 3.34 0.193 -- -0.0727 -- -1.33 0.0305 -- 71.8 5903 -- --
92.61 0.451 3.33 0.0936 0.206 -- -0.466 -- 0.0164 5.43 -- -- -- --
93.14 0.452 3.33 0.0927 0.204 -- -- -- 0.0186 5.68 -- -- -- --
93.84 0.451 3.36 0.149 -- -0.279 -- -- -0.0964 -- 85.26 6969 -- --
92.25 0.447 3.35 -- 0.216 -0.234 -- -- -0.0918 5.7 85.59 7528 -- --
95.31 0.456 3.33 0.0992 -- -- -- -- 0.0235 -- -- -- -- --
93.36 0.452 3.33 -- 0.206 -- -- -- 0.00826 5.66 -- -- -- --
94.4 0.453 3.36 -- -- -0.243 -- -- -0.0963 -- 86 6971 -- --
95.57 0.456 3.33 -- -- -- -- -- 0.0124 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 83.07 humidity 80.0 10 < th dose independent rect. 6 2
3 83.16 radiation 10.0 30 > th dose independent rect. 7 1
6 83.64 humidity 80.0 10 < th dose independent rect. 24 8
8 83.66 humidity 80.0 10 < th dose independent rect. 2 6
26 84.75 atmosphere 995.0 720 > th dose independent rect. 23 16
29 84.88 precipitation 0.1 720 < th dose independent rect. 15 8
30 84.88 precipitation 0.1 720 < th dose dependent rect. 15 8
37 85.14 radiation 10.0 10 > th dose independent rect. 16 16
38 85.22 humidity 50.0 720 > th dose independent rect. 3 8
40 85.30 temperature 10.0 720 > th dose independent rect. 15 8
41 85.30 temperature 10.0 720 > th dose independent rect. 23 16
42 85.38 temperature 10.0 720 > th dose independent rect. 3 8
43 85.38 atmosphere 995.0 720 > th dose independent rect. 3 8
44 85.38 temperature 10.0 720 > th dose independent rect. 11 16
45 85.55 precipitation 0.1 720 < th dose independent rect. 11 16
46 85.55 precipitation 0.1 720 < th dose dependent rect. 11 16
47 85.64 atmosphere 995.0 720 > th dose independent rect. 15 8
48 85.67 atmosphere 995.0 720 > th dose independent rect. 11 16
51 85.80 atmosphere 1000.0 30 > th dose independent rect. 23 23
52 85.82 wind 9.0 720 < th dose independent rect. 3 8
53 85.85 temperature 25.0 30 > th dose independent rect. 7 1
54 85.91 atmosphere 1000.0 30 > th dose independent rect. 3 23
55 85.95 atmosphere 1005.0 90 > th dose dependent rect. 2 1
56 85.98 radiation 1.0 43200 < th dose dependent rect. 3 1
64 86.36 temperature 20.0 30 > th dose dependent rect. 2 1
68 86.40 atmosphere 1005.0 30 > th dose independent rect. 2 1
74 86.42 temperature 20.0 30 > th dose independent rect. 2 1
79 86.43 wind 9.0 1440 < th dose independent rect. 3 1
80 86.43 temperature 10.0 1440 > th dose independent rect. 3 1
83 86.43 temperature 30.0 1440 < th dose independent rect. 3 1
87 86.43 humidity 50.0 1440 > th dose independent rect. 3 1
96 86.43 atmosphere 995.0 1440 > th dose independent rect. 3 1
97 86.43 radiation 1.0 1440 < th dose independent rect. 3 1
117 86.43 temperature 10.0 1440 > th dose independent rect. 4 23
128 86.47 wind 3.0 30 < th dose independent rect. 2 1
131 86.49 wind 3.0 30 < th dose dependent rect. 2 1
138 86.55 humidity 80.0 30 > th dose independent rect. 2 1
140 86.55 humidity 50.0 30 > th dose dependent rect. 2 1
144 86.56 temperature 10.0 30 > th dose independent rect. 2 1
146 86.56 temperature 30.0 30 < th dose independent rect. 2 1
147 86.56 humidity 50.0 30 > th dose independent rect. 2 1
151 86.56 atmosphere 1010.0 30 < th dose independent rect. 2 1
153 86.56 radiation 1.0 30 < th dose independent rect. 2 1
158 86.56 precipitation 0.1 30 < th dose independent rect. 2 1
159 86.56 temperature 10.0 30 > th dose independent rect. 3 23
161 86.56 radiation 1.0 30 < th dose dependent rect. 2 1
166 86.56 precipitation 0.1 30 < th dose dependent rect. 2 1
167 86.60 wind 1.0 10 < th dose independent rect. 13 1
169 86.60 wind 1.0 10 < th dose dependent rect. 13 1
176 86.72 atmosphere 1000.0 90 < th dose independent rect. 12 1
178 86.72 atmosphere 1000.0 10 < th dose dependent rect. 13 1
210 86.77 atmosphere 1015.0 30 < th dose dependent rect. 2 1
215 86.80 radiation 10.0 43200 < th dose dependent rect. 23 1
216 86.81 wind 1.0 30 > th dose independent rect. 2 1
220 86.83 temperature 30.0 30 < th dose dependent rect. 2 1
234 86.97 wind 9.0 720 < th dose independent rect. 15 8
237 87.03 precipitation 0.1 1440 < th dose independent rect. 23 1
238 87.03 precipitation 0.1 1440 < th dose dependent rect. 23 1
244 87.07 radiation 1.0 4320 < th dose dependent rect. 23 1
249 87.12 precipitation 0.1 720 < th dose independent rect. 3 8
251 87.12 precipitation 0.1 720 < th dose dependent rect. 3 8
252 87.13 temperature 25.0 10 > th dose dependent rect. 22 1
256 87.18 radiation 40.0 10 > th dose dependent rect. 14 1
295 87.20 precipitation 0.1 30 < th dose independent rect. 3 23
296 87.20 precipitation 0.1 30 < th dose dependent rect. 3 23
300 87.23 wind 9.0 1440 < th dose independent rect. 23 1
301 87.23 temperature 10.0 1440 > th dose independent rect. 23 1
304 87.23 temperature 30.0 1440 < th dose independent rect. 23 1
308 87.23 humidity 50.0 1440 > th dose independent rect. 23 1
318 87.23 atmosphere 995.0 1440 > th dose independent rect. 23 1
319 87.23 radiation 1.0 1440 < th dose independent rect. 23 1
339 87.23 temperature 10.0 1440 > th dose independent rect. 24 23
347 87.24 temperature 25.0 30 > th dose independent rect. 22 1
349 87.25 atmosphere 1005.0 30 > th dose dependent rect. 22 1
353 87.26 atmosphere 1005.0 30 > th dose independent rect. 22 1
357 87.27 wind 1.0 30 > th dose independent rect. 22 1
358 87.27 humidity 80.0 30 > th dose independent rect. 22 1
364 87.28 humidity 90.0 30 < th dose independent rect. 22 1
369 87.29 wind 3.0 30 < th dose independent rect. 22 1
374 87.29 humidity 60.0 30 > th dose dependent rect. 22 1
379 87.30 temperature 10.0 30 > th dose independent rect. 22 1
381 87.30 temperature 30.0 30 < th dose independent rect. 22 1
382 87.30 humidity 50.0 30 > th dose independent rect. 22 1
385 87.30 atmosphere 995.0 30 > th dose independent rect. 22 1
387 87.30 atmosphere 1010.0 30 < th dose independent rect. 22 1
389 87.30 radiation 1.0 30 < th dose independent rect. 22 1
394 87.30 precipitation 0.1 30 < th dose independent rect. 22 1
395 87.30 temperature 10.0 30 > th dose independent rect. 23 23
398 87.30 radiation 1.0 30 < th dose dependent rect. 22 1
403 87.30 precipitation 0.1 30 < th dose dependent rect. 22 1
404 87.31 wind 7.0 30 < th dose dependent rect. 22 1
425 87.33 wind 1.0 30 > th dose dependent rect. 22 1
432 87.34 humidity 90.0 30 < th dose dependent rect. 22 1
434 87.35 atmosphere 1015.0 30 < th dose dependent rect. 22 1
437 87.38 atmosphere 1000.0 30 > th dose independent rect. 8 23
438 87.38 temperature 30.0 30 < th dose dependent rect. 22 1
452 87.47 precipitation 0.1 30 < th dose independent rect. 23 23
454 87.47 precipitation 0.1 30 < th dose dependent rect. 23 23
458 87.49 precipitation 0.1 720 < th dose independent rect. 23 16
459 87.49 precipitation 0.1 720 < th dose dependent rect. 23 16
494 87.58 humidity 90.0 10 < th dose dependent rect. 7 1
495 87.59 wind 9.0 30 < th dose independent rect. 3 23
501 87.65 atmosphere 1015.0 720 < th dose independent rect. 3 8
504 87.66 wind 9.0 30 < th dose independent rect. 23 23
508 87.67 radiation 40.0 720 < th dose independent rect. 15 8
521 87.82 atmosphere 1005.0 30 > th dose independent rect. 7 1
542 88.05 humidity 50.0 30 > th dose independent rect. 23 23
545 88.13 radiation 10.0 30 < th dose independent rect. 3 23
549 88.17 humidity 50.0 30 > th dose independent rect. 3 23
551 88.18 radiation 10.0 10 < th dose dependent rect. 3 23
556 88.23 radiation 10.0 30 < th dose independent rect. 23 23
557 88.24 humidity 90.0 90 < th dose dependent rect. 2 6
568 88.36 temperature 25.0 270 > th dose independent rect. 19 8
570 88.38 radiation 40.0 10 > th dose independent rect. 14 1
610 88.39 wind 5.0 10 < th dose dependent rect. 7 1
611 88.42 wind 5.0 30 < th dose independent rect. 7 1
614 88.44 temperature 20.0 30 > th dose dependent rect. 7 1
628 88.52 wind 1.0 30 > th dose independent rect. 7 1
633 88.54 radiation 10.0 10 < th dose dependent rect. 23 23
640 88.57 radiation 1.0 10 > th dose dependent rect. 7 1
644 88.61 humidity 90.0 90 < th dose independent rect. 2 1
645 88.61 radiation 10.0 10 > th dose independent rect. 13 19
661 88.71 wind 1.0 10 > th dose independent rect. 23 23
666 88.74 humidity 90.0 90 < th dose independent rect. 1 22
670 88.77 humidity 50.0 720 > th dose independent rect. 23 16
676 88.81 humidity 80.0 14400 < th dose dependent rect. 4 5
677 88.82 wind 9.0 1440 < th dose independent rect. 8 1
680 88.82 temperature 10.0 1440 > th dose independent rect. 8 1
685 88.82 humidity 50.0 1440 > th dose independent rect. 8 1
687 88.82 atmosphere 995.0 1440 > th dose independent rect. 8 1
690 88.82 atmosphere 1015.0 1440 < th dose independent rect. 8 1
691 88.82 temperature 10.0 1440 > th dose independent rect. 9 23
695 88.82 humidity 80.0 14400 < th dose dependent rect. 7 2
698 88.83 precipitation 0.1 30 < th dose independent rect. 7 1
701 88.83 precipitation 0.1 30 < th dose dependent rect. 7 1
702 88.83 atmosphere 1000.0 10 < th dose dependent rect. 13 7
705 88.84 atmosphere 995.0 30 > th dose dependent rect. 7 1
707 88.85 temperature 10.0 30 > th dose independent rect. 7 1
710 88.85 temperature 30.0 30 < th dose independent rect. 7 1
711 88.85 humidity 50.0 30 > th dose independent rect. 7 1
713 88.85 atmosphere 995.0 30 > th dose independent rect. 7 1
714 88.85 atmosphere 1010.0 30 < th dose independent rect. 7 1
716 88.85 temperature 10.0 30 > th dose independent rect. 8 23
721 88.86 atmosphere 1000.0 90 > th dose independent rect. 11 12
728 88.90 wind 9.0 30 < th dose independent rect. 8 23
734 88.91 atmosphere 1005.0 30 > th dose dependent rect. 20 3
747 88.92 wind 9.0 720 < th dose independent rect. 11 16
754 88.94 radiation 10.0 10 > th dose independent sin 11 NA
755 88.94 humidity 70.0 14400 > th dose independent rect. 8 1
764 88.97 radiation 40.0 30 < th dose independent rect. 7 1
784 88.99 atmosphere 1000.0 90 > th dose independent rect. 8 11
785 88.99 wind 1.0 10 > th dose independent rect. 8 23
801 89.02 temperature 30.0 720 < th dose independent rect. 15 8
809 89.06 atmosphere 1000.0 30 > th dose independent rect. 23 21
813 89.08 atmosphere 1000.0 720 > th dose independent rect. 8 3
814 89.08 humidity 70.0 14400 > th dose independent rect. 4 5
817 89.09 humidity 70.0 14400 < th dose independent rect. 8 1
818 89.09 humidity 70.0 14400 > th dose independent rect. 6 3
827 89.09 precipitation 0.1 30 < th dose independent rect. 8 23
829 89.09 precipitation 0.1 30 < th dose dependent rect. 8 23
831 89.10 atmosphere 1000.0 720 > th dose independent rect. 23 12
841 89.13 precipitation 0.1 1440 < th dose independent rect. 8 1
844 89.13 precipitation 0.1 1440 < th dose dependent rect. 8 1
848 89.17 atmosphere 1000.0 90 > th dose independent rect. 23 12
851 89.18 wind 1.0 720 > th dose independent rect. 15 8
857 89.22 temperature 25.0 270 > th dose dependent rect. 19 8
861 89.23 wind 9.0 720 < th dose independent rect. 23 16
871 89.26 atmosphere 1000.0 10 < th dose dependent rect. 13 14
872 89.27 temperature 25.0 270 > th dose independent rect. 22 5
885 89.29 atmosphere 1000.0 10 < th dose dependent rect. 13 21
937 89.35 radiation 40.0 10 > th dose dependent sin 13 NA
939 89.35 humidity 90.0 30 < th dose dependent rect. 22 10
945 89.37 humidity 50.0 30 > th dose independent rect. 8 23
946 89.37 atmosphere 1000.0 10 > th dose independent rect. 11 23
950 89.38 atmosphere 1000.0 720 > th dose independent rect. 21 14
956 89.41 radiation 40.0 10 > th dose independent sin 13 NA
962 89.42 atmosphere 995.0 30 > th dose dependent rect. 23 23
964 89.44 radiation 20.0 10 < th dose independent rect. 7 1
965 89.44 atmosphere 995.0 720 > th dose dependent rect. 8 1
969 89.45 humidity 60.0 43200 < th dose independent rect. 11 1
970 89.45 wind 3.0 4320 < th dose independent rect. 5 2
971 89.45 atmosphere 1000.0 720 > th dose independent rect. 11 2
975 89.46 atmosphere 1000.0 720 > th dose independent rect. 23 10
978 89.47 wind 3.0 4320 > th dose independent rect. 5 2
981 89.47 atmosphere 1000.0 90 < th dose dependent rect. 6 8
986 89.49 radiation 40.0 10 < th dose independent rect. 23 23
991 89.50 atmosphere 1000.0 270 < th dose independent rect. 10 4
993 89.50 atmosphere 1015.0 30 < th dose dependent rect. 7 1