Os08g0487000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0487000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.24 | 0.41 | 6.89 | -1.5 | 0.235 | -3.1 | -0.318 | -0.791 | -0.337 | 20.5 | 24.66 | 4031 | -- | -- |
| 76.63 | 0.408 | 6.91 | -1.55 | 0.162 | -2.99 | -0.354 | -- | -0.347 | 20.4 | 25.86 | 3831 | -- | -- |
| 76.5 | 0.407 | 6.89 | -1.49 | 0.246 | -3.1 | -- | -0.862 | -0.335 | 21.1 | 24.53 | 4061 | -- | -- |
| 76.89 | 0.408 | 6.91 | -1.58 | 0.177 | -3 | -- | -- | -0.35 | 20.9 | 25.51 | 3861 | -- | -- |
| 78.11 | 0.412 | 6.9 | -1.53 | -- | -3.07 | -- | -0.153 | -0.349 | -- | 26.15 | 3705 | -- | -- |
| 224.27 | 0.702 | 6.74 | -0.133 | 0.328 | -- | -0.00336 | -- | 0.414 | 23.1 | -- | -- | -- | -- |
| 224.27 | 0.701 | 6.74 | -0.133 | 0.328 | -- | -- | -- | 0.414 | 23.1 | -- | -- | -- | -- |
| 78.08 | 0.412 | 6.91 | -1.54 | -- | -3.03 | -- | -- | -0.348 | -- | 26.3 | 3724 | -- | -- |
| 112.15 | 0.493 | 6.84 | -- | 0.0773 | -2.23 | -- | -- | -0.0318 | 20.9 | 28.07 | 2256 | -- | -- |
| 230.97 | 0.71 | 6.73 | -0.125 | -- | -- | -- | -- | 0.417 | -- | -- | -- | -- | -- |
| 224.73 | 0.701 | 6.74 | -- | 0.327 | -- | -- | -- | 0.429 | 23 | -- | -- | -- | -- |
| 112.4 | 0.494 | 6.84 | -- | -- | -2.24 | -- | -- | -0.0394 | -- | 28.63 | 2248 | -- | -- |
| 231.39 | 0.71 | 6.73 | -- | -- | -- | -- | -- | 0.431 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.76 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 2 |
| 2 | 75.81 | temperature | 25 | 4320 | < th | dose dependent | rect. | 13 | 18 |
| 14 | 76.04 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 18 |
| 16 | 76.08 | temperature | 25 | 4320 | < th | dose dependent | sin | 12 | NA |
| 28 | 76.19 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 6 |
| 61 | 76.40 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 10 |
| 113 | 76.64 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 2 |
| 186 | 77.00 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 212 | 77.29 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 7 |
| 218 | 77.31 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 23 |
| 219 | 77.31 | temperature | 25 | 4320 | < th | dose dependent | rect. | 5 | 23 |
| 221 | 77.35 | temperature | 10 | 4320 | > th | dose dependent | rect. | 22 | 5 |
| 224 | 77.36 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 9 |
| 361 | 78.47 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 395 | 78.66 | temperature | 10 | 4320 | > th | dose dependent | sin | 10 | NA |
| 482 | 79.27 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 10 |
| 511 | 79.40 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 537 | 79.51 | temperature | 25 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 628 | 79.83 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 1 |