Os08g0482500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0482500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128.26 | 0.532 | 7.2 | -1.77 | 0.6 | -0.699 | 0.816 | -0.169 | -0.377 | 22.5 | 19.9 | 175 | -- | -- |
| 128.36 | 0.528 | 7.2 | -1.79 | 0.6 | -0.677 | 0.785 | -- | -0.382 | 22.5 | 19.9 | 174 | -- | -- |
| 130.85 | 0.533 | 7.2 | -1.83 | 0.598 | -0.701 | -- | -0.0183 | -0.385 | 22.5 | 19.9 | 176 | -- | -- |
| 130.85 | 0.533 | 7.2 | -1.84 | 0.597 | -0.707 | -- | -- | -0.386 | 22.5 | 19.88 | 176 | -- | -- |
| 149.64 | 0.57 | 7.18 | -1.77 | -- | -0.792 | -- | -0.631 | -0.387 | -- | 19.8 | 475 | -- | -- |
| 142.46 | 0.56 | 7.17 | -1.58 | 0.545 | -- | 0.941 | -- | -0.268 | 21.8 | -- | -- | -- | -- |
| 145.85 | 0.566 | 7.17 | -1.62 | 0.541 | -- | -- | -- | -0.27 | 21.8 | -- | -- | -- | -- |
| 150.44 | 0.571 | 7.19 | -1.83 | -- | -0.634 | -- | -- | -0.416 | -- | 20.79 | 753 | -- | -- |
| 211.6 | 0.677 | 7.14 | -- | 0.579 | -0.31 | -- | -- | -0.153 | 22.1 | 20.6 | 139 | -- | -- |
| 163.3 | 0.597 | 7.16 | -1.62 | -- | -- | -- | -- | -0.27 | -- | -- | -- | -- | -- |
| 215.07 | 0.686 | 7.13 | -- | 0.537 | -- | -- | -- | -0.0895 | 21.6 | -- | -- | -- | -- |
| 230.5 | 0.707 | 7.13 | -- | -- | -0.2 | -- | -- | -0.135 | -- | 20.6 | 145 | -- | -- |
| 232.11 | 0.711 | 7.12 | -- | -- | -- | -- | -- | -0.0912 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.47 | temperature | 20.0 | 90 | > th | dose independent | rect. | 20 | 18 |
| 26 | 121.14 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 27 | 121.23 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 14 | 19 |
| 28 | 121.23 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 14 | 19 |
| 30 | 121.34 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 17 |
| 35 | 121.50 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 40 | 121.67 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 42 | 121.73 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 45 | 121.73 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 5 |
| 46 | 121.73 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 49 | 121.73 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 5 |
| 50 | 121.74 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 52 | 121.74 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 53 | 121.74 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 5 |
| 54 | 121.74 | temperature | 10.0 | 30 | > th | dose independent | rect. | 14 | 19 |
| 63 | 121.91 | wind | 9.0 | 30 | < th | dose independent | rect. | 14 | 19 |
| 64 | 121.94 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 5 |
| 66 | 121.99 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 74 | 122.20 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 75 | 122.22 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 20 |
| 79 | 122.32 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 80 | 122.32 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 2 |
| 82 | 122.36 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 85 | 122.45 | radiation | 1.0 | 30 | > th | dose independent | rect. | 9 | 5 |
| 88 | 122.49 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 14 | 19 |
| 90 | 122.50 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 23 |
| 110 | 122.81 | humidity | 90.0 | 30 | < th | dose independent | rect. | 9 | 5 |
| 114 | 122.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 23 |
| 115 | 122.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 120 | 122.95 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 19 |
| 121 | 122.97 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 9 | 5 |
| 137 | 123.26 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 141 | 123.35 | radiation | 1.0 | 30 | > th | dose independent | rect. | 14 | 19 |
| 148 | 123.42 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 154 | 123.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 155 | 123.49 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 161 | 123.55 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 163 | 123.56 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 177 | 123.66 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 180 | 123.72 | wind | 1.0 | 30 | > th | dose independent | rect. | 14 | 19 |
| 191 | 123.83 | humidity | 50.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 193 | 123.88 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 195 | 123.89 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 1 |
| 196 | 123.89 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 205 | 123.94 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 18 |
| 211 | 124.02 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 212 | 124.02 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 213 | 124.02 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 214 | 124.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 219 | 124.04 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 240 | 124.21 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 242 | 124.22 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 289 | 124.56 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 299 | 124.63 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 306 | 124.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 309 | 124.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 317 | 124.74 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 319 | 124.75 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 323 | 124.82 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 326 | 124.85 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 351 | 125.02 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 14 | 18 |
| 361 | 125.07 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 363 | 125.09 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 408 | 125.33 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 422 | 125.40 | wind | 9.0 | 270 | < th | dose dependent | rect. | 8 | 3 |
| 448 | 125.54 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 485 | 125.76 | temperature | 20.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 489 | 125.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 490 | 125.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 493 | 125.80 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 494 | 125.80 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 537 | 125.95 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 21 |
| 546 | 125.98 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 552 | 126.01 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 582 | 126.07 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 4 | 9 |
| 611 | 126.17 | humidity | 80.0 | 10 | < th | dose independent | rect. | 14 | 19 |
| 613 | 126.18 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 623 | 126.19 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 21 |
| 652 | 126.27 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 658 | 126.30 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 670 | 126.34 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 14 | 19 |
| 672 | 126.34 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 8 |
| 678 | 126.37 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 683 | 126.38 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 686 | 126.38 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 1 | 7 |
| 689 | 126.40 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 710 | 126.45 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 715 | 126.46 | radiation | 1.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 731 | 126.49 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 5 | 4 |
| 733 | 126.50 | temperature | 15.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 736 | 126.51 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 789 | 126.65 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 831 | 126.73 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 835 | 126.74 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 23 |
| 874 | 126.83 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 876 | 126.84 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 6 |
| 914 | 126.93 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 919 | 126.93 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 9 | 5 |
| 922 | 126.94 | radiation | 1.0 | 30 | > th | dose independent | rect. | 18 | 15 |
| 924 | 126.94 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 925 | 126.94 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 22 |
| 929 | 126.95 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 937 | 126.99 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 972 | 127.05 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 7 | 2 |
| 975 | 127.07 | wind | 7.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 981 | 127.07 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 984 | 127.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 3 |
| 985 | 127.08 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 9 |
| 987 | 127.08 | wind | 9.0 | 14400 | > th | dose independent | rect. | 21 | 16 |
| 990 | 127.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 3 |
| 1000 | 127.10 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 23 | 7 |