Os08g0482300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutelin family protein.
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Os08g0482300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutelin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.28 | 0.391 | 9.85 | -0.51 | 1.44 | 0.706 | 0.0483 | 1.52 | 0.133 | 20.4 | 3.966 | 137 | -- | -- |
| 73.09 | 0.398 | 9.85 | -0.497 | 1.43 | 0.651 | -0.478 | -- | 0.131 | 20.4 | 3.129 | 142 | -- | -- |
| 69.29 | 0.388 | 9.85 | -0.511 | 1.44 | 0.704 | -- | 1.5 | 0.133 | 20.4 | 4.368 | 136 | -- | -- |
| 73.77 | 0.4 | 9.84 | -0.485 | 1.43 | 0.605 | -- | -- | 0.136 | 20.3 | 4.736 | 134 | -- | -- |
| 115.05 | 0.5 | 9.81 | -0.329 | -- | 1.24 | -- | 2.32 | 0.103 | -- | -44.02 | 767 | -- | -- |
| 78.68 | 0.416 | 9.83 | -0.483 | 1.38 | -- | -0.179 | -- | 0.167 | 19.4 | -- | -- | -- | -- |
| 78.76 | 0.416 | 9.83 | -0.478 | 1.38 | -- | -- | -- | 0.167 | 19.4 | -- | -- | -- | -- |
| 107.32 | 0.482 | 9.84 | -0.589 | -- | 1.41 | -- | -- | -0.00644 | -- | -7.036 | 826 | -- | -- |
| 79.95 | 0.416 | 9.83 | -- | 1.44 | 0.596 | -- | -- | 0.192 | 20.2 | 4.85 | 128 | -- | -- |
| 179.69 | 0.626 | 9.8 | -0.5 | -- | -- | -- | -- | 0.145 | -- | -- | -- | -- | -- |
| 84.79 | 0.431 | 9.82 | -- | 1.38 | -- | -- | -- | 0.22 | 19.4 | -- | -- | -- | -- |
| 116.41 | 0.503 | 9.82 | -- | -- | 1.38 | -- | -- | 0.0621 | -- | -118.2 | 820 | -- | -- |
| 186.29 | 0.637 | 9.79 | -- | -- | -- | -- | -- | 0.2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.65 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 4 | 67.98 | humidity | 80.0 | 90 | < th | dose independent | rect. | 8 | 8 |
| 5 | 68.04 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 7 | 68.11 | radiation | 1.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 8 | 68.11 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 20 |
| 9 | 68.12 | radiation | 40.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 18 | 68.23 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 14 | 18 |
| 19 | 68.24 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 20 |
| 28 | 68.33 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 15 | 12 |
| 31 | 68.35 | radiation | 1.0 | 30 | < th | dose independent | sin | 11 | NA |
| 35 | 68.39 | radiation | 10.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 66 | 68.44 | radiation | 1.0 | 270 | > th | dose dependent | sin | 5 | NA |
| 77 | 68.50 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 84 | 68.54 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 8 |
| 102 | 68.57 | humidity | 70.0 | 90 | > th | dose independent | sin | 6 | NA |
| 104 | 68.61 | radiation | 10.0 | 270 | > th | dose independent | sin | 3 | NA |
| 118 | 68.67 | humidity | 70.0 | 270 | > th | dose independent | rect. | 2 | 11 |
| 128 | 68.75 | humidity | 70.0 | 270 | > th | dose independent | rect. | 2 | 9 |
| 129 | 68.76 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 133 | 68.78 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 151 | 68.83 | humidity | 60.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 155 | 68.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 9 |
| 157 | 68.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 184 | 68.93 | radiation | 1.0 | 270 | < th | dose independent | rect. | 15 | 12 |
| 224 | 68.99 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 8 | 8 |
| 239 | 69.01 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 265 | 69.07 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 279 | 69.10 | radiation | 20.0 | 270 | < th | dose independent | sin | 7 | NA |
| 293 | 69.13 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 8 |
| 314 | 69.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 319 | 69.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 320 | 69.17 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 321 | 69.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 15 |
| 323 | 69.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 325 | 69.18 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 343 | 69.23 | temperature | 15.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 350 | 69.26 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 12 |
| 365 | 69.29 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 390 | 69.31 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 420 | 69.37 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 22 | 7 |
| 453 | 69.43 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 466 | 69.46 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 8 |
| 467 | 69.46 | radiation | 1.0 | 90 | > th | dose dependent | sin | 23 | NA |
| 470 | 69.46 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 9 |
| 484 | 69.49 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 509 | 69.52 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 564 | 69.56 | radiation | 30.0 | 270 | < th | dose independent | rect. | 2 | 8 |
| 581 | 69.59 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 8 |
| 612 | 69.61 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 9 |
| 626 | 69.61 | radiation | 10.0 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 633 | 69.63 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 8 |
| 662 | 69.67 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 13 |
| 664 | 69.68 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 8 |
| 665 | 69.68 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 8 |
| 669 | 69.68 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 11 |
| 671 | 69.69 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 8 |
| 677 | 69.69 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 8 |
| 693 | 69.72 | wind | 9.0 | 90 | < th | dose independent | rect. | 16 | 16 |
| 707 | 69.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 722 | 69.75 | temperature | 15.0 | 10 | > th | dose independent | rect. | 16 | 17 |
| 853 | 69.82 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 922 | 69.86 | radiation | 10.0 | 90 | > th | dose dependent | no | NA | NA |