Os08g0478000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cell surface antigen domain containing protein.
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Os08g0478000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cell surface antigen domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 551.57 | 1.1 | 4.49 | 0.0312 | 0.403 | -3.08 | -1.08 | -1.87 | 0.997 | 8.36 | 1.007 | 5716 | 1.14 | 0.989 |
| 554.04 | 1.1 | 4.48 | 0.0702 | 0.399 | -3.17 | -1.15 | -- | 1.06 | 8.14 | 1.011 | 5728 | 1.14 | 0.983 |
| 554.43 | 1.1 | 4.48 | -0.00355 | 0.393 | -3.13 | -- | -1.86 | 1.03 | 8.53 | 1.011 | 5726 | 1.13 | 0.992 |
| 557.96 | 1.1 | 4.48 | 0.0397 | 0.398 | -3.16 | -- | -- | 1.05 | 8.52 | 1.013 | 5727 | 1.14 | 0.989 |
| 563.04 | 1.11 | 4.49 | -0.00409 | -- | -3.15 | -- | -1.91 | 1.04 | -- | 1.015 | 5729 | 1.14 | 1 |
| 729.31 | 1.27 | 4.58 | 0.0879 | 0.436 | -- | -1.01 | -- | 0.62 | 7.69 | -- | -- | -- | -- |
| 732.18 | 1.27 | 4.58 | 0.0631 | 0.435 | -- | -- | -- | 0.622 | 7.8 | -- | -- | -- | -- |
| 566.76 | 1.11 | 4.49 | 0.0417 | -- | -3.18 | -- | -- | 1.07 | -- | 1.014 | 5730 | 1.14 | 0.988 |
| 558.01 | 1.1 | 4.48 | -- | 0.399 | -3.16 | -- | -- | 1.05 | 8.51 | 1.014 | 5727 | 1.14 | 0.989 |
| 742.41 | 1.27 | 4.59 | 0.0683 | -- | -- | -- | -- | 0.628 | -- | -- | -- | -- | -- |
| 732.28 | 1.27 | 4.58 | -- | 0.435 | -- | -- | -- | 0.615 | 7.79 | -- | -- | -- | -- |
| 562.75 | 1.1 | 4.5 | -- | -- | -3.1 | -- | -- | 1.03 | -- | 1.025 | 5731 | 1.2 | 0.924 |
| 742.54 | 1.27 | 4.59 | -- | -- | -- | -- | -- | 0.62 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 585.76 | radiation | 10 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 3 | 588.40 | radiation | 20 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 4 | 588.57 | humidity | 70 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 19 | 592.87 | radiation | 1 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 36 | 593.99 | humidity | 70 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 39 | 594.19 | radiation | 10 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 42 | 594.22 | radiation | 10 | 43200 | > th | dose independent | rect. | 16 | 16 |
| 47 | 594.50 | radiation | 20 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 49 | 594.52 | radiation | 10 | 43200 | < th | dose dependent | rect. | 17 | 22 |
| 74 | 595.16 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 75 | 595.17 | radiation | 30 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 76 | 595.27 | radiation | 40 | 43200 | > th | dose independent | sin | 13 | NA |
| 92 | 595.55 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 20 |
| 96 | 595.63 | radiation | 30 | 43200 | < th | dose dependent | rect. | 10 | 8 |
| 100 | 595.70 | radiation | 20 | 43200 | < th | dose dependent | rect. | 11 | 22 |
| 107 | 595.72 | radiation | 30 | 43200 | < th | dose dependent | rect. | 10 | 13 |
| 109 | 595.72 | radiation | 30 | 43200 | < th | dose dependent | rect. | 10 | 16 |
| 115 | 595.73 | radiation | 30 | 43200 | < th | dose dependent | rect. | 10 | 20 |
| 131 | 595.78 | radiation | 10 | 43200 | < th | dose dependent | sin | 2 | NA |
| 132 | 595.79 | radiation | 20 | 43200 | < th | dose dependent | sin | 23 | NA |
| 151 | 595.86 | radiation | 20 | 43200 | > th | dose independent | rect. | 12 | 20 |
| 153 | 595.87 | radiation | 10 | 43200 | > th | dose independent | sin | 12 | NA |
| 163 | 595.96 | radiation | 10 | 43200 | > th | dose independent | rect. | 16 | 22 |
| 193 | 596.11 | radiation | 20 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 211 | 596.15 | radiation | 10 | 43200 | < th | dose dependent | rect. | 22 | 18 |
| 212 | 596.16 | radiation | 10 | 43200 | < th | dose dependent | rect. | 4 | 12 |
| 246 | 596.23 | radiation | 20 | 43200 | < th | dose dependent | rect. | 7 | 12 |
| 249 | 596.23 | radiation | 20 | 43200 | < th | dose dependent | rect. | 7 | 16 |
| 274 | 596.29 | radiation | 40 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 312 | 596.33 | radiation | 20 | 43200 | < th | dose dependent | no | NA | NA |
| 393 | 596.41 | radiation | 1 | 43200 | > th | dose dependent | rect. | 11 | 7 |
| 424 | 596.53 | radiation | 10 | 43200 | > th | dose independent | rect. | 17 | 14 |
| 555 | 596.97 | radiation | 20 | 43200 | > th | dose independent | sin | 19 | NA |
| 633 | 597.23 | radiation | 10 | 43200 | > th | dose independent | sin | 2 | NA |
| 650 | 597.26 | temperature | 30 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 729 | 597.44 | radiation | 10 | 43200 | > th | dose independent | rect. | 6 | 11 |
| 757 | 597.46 | humidity | 70 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 764 | 597.50 | temperature | 30 | 43200 | > th | dose dependent | rect. | 18 | 17 |
| 767 | 597.51 | radiation | 1 | 43200 | > th | dose dependent | sin | 19 | NA |
| 779 | 597.52 | radiation | 10 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 792 | 597.53 | radiation | 10 | 43200 | > th | dose independent | no | NA | NA |
| 890 | 597.58 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 3 |