Os08g0477700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heat shock protein DnaJ, N-terminal domain containing protein.
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Os08g0477700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heat shock protein DnaJ, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.17 | 0.333 | 8.37 | 1.98 | 0.317 | -0.954 | -0.686 | -0.612 | 0.555 | 13.5 | 78.13 | 1322 | -- | -- |
| 50.49 | 0.331 | 8.37 | 2.03 | 0.322 | -0.99 | -0.65 | -- | 0.566 | 13.5 | 78.4 | 1327 | -- | -- |
| 52.03 | 0.336 | 8.38 | 1.97 | 0.326 | -0.938 | -- | -0.453 | 0.552 | 13.5 | 78.53 | 1333 | -- | -- |
| 52.19 | 0.336 | 8.37 | 2.01 | 0.309 | -0.96 | -- | -- | 0.561 | 13.5 | 78.25 | 1306 | -- | -- |
| 54.59 | 0.344 | 8.38 | 2.01 | -- | -1.03 | -- | -0.0449 | 0.559 | -- | 78.72 | 1128 | -- | -- |
| 62.81 | 0.372 | 8.38 | 1.98 | 0.407 | -- | -0.544 | -- | 0.519 | 13.7 | -- | -- | -- | -- |
| 63.97 | 0.375 | 8.38 | 1.96 | 0.407 | -- | -- | -- | 0.516 | 13.7 | -- | -- | -- | -- |
| 54.59 | 0.344 | 8.38 | 2.01 | -- | -1.04 | -- | -- | 0.559 | -- | 78.54 | 1128 | -- | -- |
| 145.45 | 0.562 | 8.36 | -- | 0.263 | -1.15 | -- | -- | 0.614 | 13.6 | 86 | 2615 | -- | -- |
| 74.05 | 0.402 | 8.39 | 1.94 | -- | -- | -- | -- | 0.506 | -- | -- | -- | -- | -- |
| 164.98 | 0.601 | 8.43 | -- | 0.372 | -- | -- | -- | 0.298 | 13.6 | -- | -- | -- | -- |
| 149.16 | 0.569 | 8.38 | -- | -- | -1.24 | -- | -- | 0.452 | -- | 84 | 2535 | -- | -- |
| 173.43 | 0.615 | 8.44 | -- | -- | -- | -- | -- | 0.291 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 46.30 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 15 |
| 9 | 47.84 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 18 |
| 16 | 48.17 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 20 | 19 |
| 28 | 48.47 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 7 |
| 34 | 48.56 | humidity | 80.0 | 1440 | < th | dose independent | sin | 8 | NA |
| 40 | 48.63 | humidity | 80.0 | 720 | < th | dose independent | sin | 10 | NA |
| 58 | 48.84 | humidity | 80.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 60 | 48.86 | humidity | 80.0 | 720 | > th | dose independent | sin | 10 | NA |
| 80 | 49.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 81 | 49.02 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 19 | 13 |
| 84 | 49.06 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 13 |
| 85 | 49.07 | humidity | 80.0 | 720 | > th | dose independent | rect. | 19 | 14 |
| 87 | 49.09 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 22 |
| 115 | 49.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 132 | 49.42 | temperature | 20.0 | 270 | > th | dose independent | rect. | 15 | 22 |
| 170 | 49.72 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 1 | 7 |
| 179 | 49.77 | humidity | 80.0 | 720 | < th | dose independent | rect. | 19 | 10 |
| 212 | 49.99 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 23 | 16 |
| 221 | 50.07 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 261 | 50.26 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 273 | 50.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 276 | 50.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 287 | 50.37 | humidity | 80.0 | 720 | > th | dose independent | rect. | 20 | 9 |
| 306 | 50.48 | temperature | 20.0 | 720 | > th | dose independent | rect. | 13 | 13 |
| 314 | 50.52 | humidity | 80.0 | 720 | > th | dose independent | rect. | 20 | 7 |
| 344 | 50.63 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 375 | 50.76 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 383 | 50.78 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 385 | 50.79 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 6 |
| 402 | 50.85 | temperature | 20.0 | 720 | > th | dose independent | sin | 16 | NA |
| 409 | 50.87 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 411 | 50.87 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 6 | NA |
| 412 | 50.87 | humidity | 90.0 | 720 | < th | dose dependent | sin | 10 | NA |
| 432 | 50.95 | temperature | 20.0 | 720 | < th | dose independent | sin | 21 | NA |
| 433 | 50.95 | humidity | 80.0 | 1440 | < th | dose independent | no | NA | NA |
| 438 | 50.95 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 444 | 50.97 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 23 |
| 454 | 51.00 | temperature | 20.0 | 270 | < th | dose independent | sin | 8 | NA |
| 465 | 51.02 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 471 | 51.04 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 482 | 51.07 | temperature | 20.0 | 720 | < th | dose independent | sin | 17 | NA |
| 502 | 51.11 | humidity | 80.0 | 1440 | > th | dose independent | no | NA | NA |
| 503 | 51.11 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 548 | 51.21 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 24 | 13 |
| 549 | 51.22 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 550 | 51.22 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 15 |
| 556 | 51.23 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 8 |
| 563 | 51.23 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 564 | 51.23 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 570 | 51.24 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 585 | 51.26 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 596 | 51.28 | temperature | 20.0 | 720 | < th | dose independent | rect. | 6 | 17 |
| 605 | 51.30 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 670 | 51.39 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 688 | 51.42 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 691 | 51.43 | temperature | 20.0 | 270 | < th | dose independent | rect. | 23 | 12 |
| 700 | 51.44 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 732 | 51.47 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 807 | 51.54 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 819 | 51.57 | temperature | 20.0 | 270 | < th | dose independent | no | NA | NA |
| 852 | 51.61 | temperature | 20.0 | 720 | < th | dose independent | rect. | 20 | 3 |
| 857 | 51.61 | temperature | 20.0 | 270 | < th | dose independent | rect. | 6 | 23 |
| 865 | 51.62 | temperature | 20.0 | 270 | < th | dose independent | rect. | 10 | 23 |
| 871 | 51.63 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 6 |
| 875 | 51.64 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 883 | 51.64 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 20 | 3 |
| 886 | 51.65 | temperature | 20.0 | 270 | > th | dose independent | sin | 10 | NA |
| 919 | 51.69 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 15 |
| 938 | 51.70 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 998 | 51.78 | temperature | 20.0 | 270 | > th | dose independent | no | NA | NA |