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Os08g0477600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.94 (0.0148) R2 : 0.00105
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0216 (0.0311) R2dN8 : 0.00136 R2N8 : 0.00105
σ : 0.279
deviance : 35.63
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.18 0.226 9.96 -0.234 0.339 0.384 0.24 0.49 0.00379 0.415 69.97 1255 -- --
23.56 0.226 9.95 -0.168 0.356 0.419 0.175 -- 0.021 0.361 69.45 1210 -- --
23.39 0.225 9.96 -0.236 0.344 0.378 -- 0.423 0.004 0.421 70 1223 -- --
23.68 0.227 9.95 -0.176 0.356 0.418 -- -- 0.0201 0.397 69.45 1210 -- --
28.75 0.25 9.95 -0.312 -- 0.357 -- 0.712 -0.0474 -- 68 3058 -- --
29.86 0.256 9.95 -0.262 0.252 -- 0.0864 -- -0.0104 0.197 -- -- -- --
29.89 0.256 9.95 -0.266 0.252 -- -- -- -0.0108 0.246 -- -- -- --
28.23 0.247 9.93 -0.223 -- 0.495 -- -- 0.0728 -- 72.1 3072 -- --
24.47 0.23 9.94 -- 0.357 0.446 -- -- 0.0381 0.37 70 1214 -- --
33.89 0.272 9.95 -0.257 -- -- -- -- -0.00697 -- -- -- -- --
31.75 0.264 9.95 -- 0.248 -- -- -- 0.0188 0.189 -- -- -- --
28.56 0.249 9.94 -- -- 0.441 -- -- 0.0601 -- 71.94 1557 -- --
35.63 0.279 9.94 -- -- -- -- -- 0.0216 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.22 wind 3 43200 < th dose independent rect. 2 1
2 23.38 humidity 70 1440 > th dose independent rect. 17 20
5 23.49 wind 3 43200 > th dose independent rect. 2 1
8 23.53 humidity 70 1440 < th dose independent rect. 16 21
20 23.62 humidity 80 1440 < th dose dependent rect. 17 20
21 23.63 humidity 80 1440 < th dose dependent rect. 17 17
38 23.75 wind 3 43200 > th dose independent rect. 1 3
49 23.82 humidity 70 1440 > th dose independent sin 11 NA
56 23.84 wind 3 43200 < th dose independent rect. 1 3
57 23.86 humidity 70 720 > th dose independent rect. 17 2
58 23.86 wind 3 43200 > th dose independent rect. 20 11
59 23.86 wind 3 43200 < th dose independent rect. 20 11
61 23.87 humidity 50 4320 > th dose independent rect. 13 11
62 23.87 humidity 50 4320 > th dose independent rect. 13 15
67 23.88 humidity 50 4320 > th dose independent rect. 13 5
68 23.88 humidity 50 4320 > th dose independent rect. 13 7
77 23.88 humidity 80 1440 < th dose dependent sin 10 NA
84 23.90 humidity 50 4320 > th dose independent sin 15 NA
93 23.91 humidity 70 720 > th dose independent rect. 17 11
135 23.94 humidity 50 4320 < th dose independent rect. 13 4
136 23.94 wind 3 43200 > th dose independent rect. 23 8
189 23.98 humidity 50 4320 < th dose independent sin 15 NA
191 23.98 humidity 70 720 > th dose independent rect. 16 4
192 23.98 wind 3 43200 > th dose independent rect. 1 6
193 23.98 humidity 80 1440 < th dose independent rect. 6 7
196 23.98 humidity 70 1440 > th dose independent rect. 8 12
212 23.98 wind 5 14400 < th dose dependent rect. 3 1
238 24.02 humidity 70 1440 < th dose independent rect. 9 11
258 24.03 wind 3 43200 < th dose independent rect. 1 6
262 24.03 humidity 50 4320 < th dose dependent sin 11 NA
264 24.04 humidity 70 1440 > th dose independent no NA NA
265 24.04 wind 3 43200 > th dose independent rect. 6 1
365 24.05 humidity 70 1440 > th dose independent rect. 11 23
392 24.09 humidity 70 1440 < th dose independent no NA NA
465 24.09 humidity 80 1440 < th dose dependent no NA NA
467 24.10 humidity 70 1440 < th dose independent sin 10 NA
470 24.10 humidity 80 1440 > th dose independent rect. 6 7
474 24.10 wind 3 43200 > th dose independent rect. 1 13
476 24.10 humidity 80 1440 < th dose dependent rect. 6 21
481 24.10 humidity 80 1440 < th dose dependent rect. 1 23
489 24.10 humidity 80 1440 < th dose dependent rect. 21 23
490 24.10 humidity 80 1440 < th dose dependent rect. 23 23
493 24.11 humidity 70 1440 < th dose independent rect. 16 2
507 24.12 humidity 70 1440 > th dose independent rect. 9 3
514 24.12 wind 1 14400 > th dose dependent rect. 3 1
527 24.13 humidity 70 1440 > th dose independent rect. 15 7
593 24.14 wind 3 43200 > th dose independent rect. 23 15
616 24.15 wind 9 43200 > th dose independent rect. 10 4
639 24.16 humidity 70 1440 < th dose independent rect. 9 4
646 24.16 wind 3 43200 < th dose independent rect. 1 13
649 24.16 humidity 70 1440 < th dose independent rect. 19 23
656 24.17 humidity 70 1440 > th dose independent sin 17 NA
658 24.17 humidity 50 4320 < th dose independent no NA NA
659 24.17 wind 3 43200 < th dose independent rect. 6 1
660 24.17 humidity 70 1440 > th dose independent rect. 9 1
803 24.17 wind 5 43200 < th dose dependent rect. 21 10
812 24.18 wind 3 43200 > th dose independent sin 9 NA
824 24.18 wind 5 43200 < th dose dependent rect. 1 2
844 24.19 humidity 60 1440 > th dose dependent rect. 7 6
852 24.20 wind 9 43200 < th dose independent rect. 10 4
868 24.20 wind 3 43200 < th dose independent rect. 23 15
898 24.22 wind 3 43200 < th dose independent sin 9 NA
915 24.23 humidity 70 1440 < th dose independent sin 20 NA
955 24.24 humidity 50 4320 > th dose independent rect. 3 21
976 24.25 humidity 50 4320 > th dose independent rect. 1 17
977 24.25 humidity 50 4320 > th dose independent rect. 1 19
978 24.25 humidity 50 4320 > th dose independent rect. 3 19
989 24.25 humidity 60 1440 > th dose dependent rect. 10 2
991 24.26 humidity 50 4320 > th dose independent no NA NA
993 24.26 wind 3 43200 < th dose independent rect. 23 5
995 24.26 humidity 70 1440 < th dose independent rect. 15 5