Os08g0469700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : MORN motif repeat containing protein.
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Os08g0469700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : MORN motif repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.54 | 0.397 | 11.7 | -0.115 | 1.46 | -0.588 | -0.205 | 1.88 | -0.66 | 3.78 | 93 | 505 | -- | -- |
| 76.61 | 0.408 | 11.7 | -0.0353 | 1.45 | -0.58 | -0.0661 | -- | -0.665 | 3.81 | 93 | 525 | -- | -- |
| 71.67 | 0.394 | 11.7 | -0.112 | 1.46 | -0.597 | -- | 1.86 | -0.659 | 3.8 | 93 | 506 | -- | -- |
| 76.48 | 0.407 | 11.7 | 0.00109 | 1.48 | -0.633 | -- | -- | -0.646 | 3.88 | 93 | 528 | -- | -- |
| 127.69 | 0.526 | 11.8 | 0.245 | -- | 1.13 | -- | -0.548 | -0.39 | -- | 69.01 | 202 | -- | -- |
| 80.75 | 0.421 | 11.7 | -0.0248 | 1.4 | -- | -0.274 | -- | -0.566 | 3.48 | -- | -- | -- | -- |
| 80.97 | 0.421 | 11.7 | -0.02 | 1.4 | -- | -- | -- | -0.565 | 3.52 | -- | -- | -- | -- |
| 123.55 | 0.518 | 11.7 | 0.0328 | -- | 1.16 | -- | -- | -0.475 | -- | 65 | 200 | -- | -- |
| 76.48 | 0.407 | 11.7 | -- | 1.48 | -0.628 | -- | -- | -0.647 | 3.87 | 93 | 531 | -- | -- |
| 190.98 | 0.646 | 11.7 | 0.0391 | -- | -- | -- | -- | -0.528 | -- | -- | -- | -- | -- |
| 80.98 | 0.421 | 11.7 | -- | 1.4 | -- | -- | -- | -0.563 | 3.52 | -- | -- | -- | -- |
| 123.49 | 0.518 | 11.7 | -- | -- | 1.17 | -- | -- | -0.469 | -- | 65 | 200 | -- | -- |
| 191.02 | 0.645 | 11.7 | -- | -- | -- | -- | -- | -0.532 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.72 | wind | 1.0 | 90 | > th | dose independent | rect. | 16 | 17 |
| 6 | 65.26 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 16 | 17 |
| 7 | 65.42 | humidity | 60.0 | 90 | > th | dose independent | rect. | 16 | 17 |
| 8 | 65.78 | temperature | 30.0 | 90 | < th | dose independent | rect. | 16 | 17 |
| 10 | 65.83 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 16 | 17 |
| 11 | 65.87 | wind | 1.0 | 90 | > th | dose independent | rect. | 9 | 7 |
| 12 | 65.94 | radiation | 30.0 | 90 | < th | dose independent | rect. | 16 | 18 |
| 14 | 65.96 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 18 | 66.08 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 9 | 7 |
| 20 | 66.12 | wind | 9.0 | 90 | < th | dose independent | rect. | 16 | 17 |
| 25 | 66.32 | temperature | 10.0 | 90 | > th | dose independent | rect. | 9 | 7 |
| 26 | 66.32 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 9 | 7 |
| 27 | 66.32 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 7 |
| 28 | 66.32 | temperature | 10.0 | 90 | > th | dose independent | rect. | 16 | 17 |
| 30 | 66.32 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 16 | 17 |
| 31 | 66.32 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 7 |
| 32 | 66.32 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 16 | 17 |
| 38 | 66.41 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 21 | 16 |
| 44 | 66.54 | humidity | 50.0 | 90 | > th | dose independent | rect. | 9 | 7 |
| 48 | 66.64 | radiation | 30.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 58 | 66.92 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 7 |
| 65 | 66.96 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 71 | 67.06 | radiation | 1.0 | 90 | > th | dose independent | rect. | 9 | 7 |
| 76 | 67.11 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 16 | 17 |
| 84 | 67.19 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 86 | 67.20 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 14 | 18 |
| 94 | 67.24 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 107 | 67.29 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 18 |
| 108 | 67.29 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 18 |
| 120 | 67.34 | radiation | 40.0 | 10 | < th | dose independent | rect. | 16 | 18 |
| 128 | 67.37 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 16 | 18 |
| 137 | 67.44 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 7 |
| 171 | 67.60 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 242 | 67.81 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 7 |
| 250 | 67.81 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 17 |
| 273 | 67.86 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 275 | 67.86 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 18 | 16 |
| 282 | 67.87 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 9 |
| 303 | 67.95 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 16 | 17 |
| 305 | 67.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 9 |
| 306 | 67.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 9 |
| 307 | 67.97 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 9 |
| 308 | 67.97 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 15 |
| 321 | 68.00 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 15 |
| 325 | 68.01 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 8 |
| 351 | 68.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 8 |
| 376 | 68.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 17 |
| 380 | 68.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 17 |
| 402 | 68.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 467 | 68.32 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 16 |
| 496 | 68.39 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 15 |
| 513 | 68.42 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 547 | 68.52 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 639 | 68.71 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 704 | 68.82 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 14 | 6 |
| 713 | 68.84 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 9 | 7 |
| 716 | 68.85 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 13 | 7 |
| 733 | 68.89 | radiation | 1.0 | 90 | > th | dose independent | rect. | 9 | 10 |
| 849 | 69.03 | humidity | 90.0 | 10 | < th | dose independent | rect. | 16 | 17 |
| 915 | 69.13 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 16 | 5 |
| 925 | 69.15 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 8 |
| 950 | 69.20 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 961 | 69.22 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 18 | 21 |
| 977 | 69.24 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 7 |
| 983 | 69.26 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 18 | 16 |