Os08g0465900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os08g0465900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 186.91 | 0.642 | 4.29 | -0.213 | 1.18 | 1.64 | 0.588 | -3.94 | 0.0976 | 22.6 | 24.1 | 297 | -- | -- |
| 202.23 | 0.662 | 4.34 | -0.515 | 1.4 | 2.8 | 0.667 | -- | 0.0497 | 22.3 | 22.3 | 359 | -- | -- |
| 187.94 | 0.639 | 4.29 | -0.22 | 1.22 | 1.68 | -- | -3.83 | 0.108 | 22.6 | 23.99 | 332 | -- | -- |
| 199.96 | 0.659 | 4.37 | -0.724 | 1.22 | 2.65 | -- | -- | -0.0489 | 22.6 | 22.17 | 345 | -- | -- |
| 255.37 | 0.748 | 4.28 | -0.41 | -- | 2.16 | -- | -2.56 | 0.101 | -- | 24.16 | 79 | -- | -- |
| 266.59 | 0.765 | 4.43 | -1.3 | 1.22 | -- | 0.254 | -- | -0.366 | 23.1 | -- | -- | -- | -- |
| 266.85 | 0.765 | 4.43 | -1.31 | 1.22 | -- | -- | -- | -0.368 | 23.1 | -- | -- | -- | -- |
| 265.89 | 0.759 | 4.32 | -0.7 | -- | 2.62 | -- | -- | 1.13e-05 | -- | 23.38 | 80 | -- | -- |
| 212.29 | 0.679 | 4.34 | -- | 1.23 | 3.1 | -- | -- | 0.0549 | 22.5 | 22.01 | 349 | -- | -- |
| 359.05 | 0.885 | 4.4 | -1.28 | -- | -- | -- | -- | -0.357 | -- | -- | -- | -- | -- |
| 312.19 | 0.827 | 4.4 | -- | 1.2 | -- | -- | -- | -0.222 | 23.1 | -- | -- | -- | -- |
| 278.5 | 0.777 | 4.3 | -- | -- | 2.89 | -- | -- | 0.114 | -- | 23.38 | 85 | -- | -- |
| 402.45 | 0.936 | 4.37 | -- | -- | -- | -- | -- | -0.215 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 186.41 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 3 | 186.66 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 4 | 186.78 | temperature | 25 | 90 | < th | dose dependent | sin | 6 | NA |
| 9 | 187.51 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 22 |
| 26 | 188.51 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 20 |
| 31 | 188.76 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 40 | 189.04 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 18 |
| 47 | 189.26 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 61 | 189.86 | temperature | 25 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 93 | 190.77 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 16 |
| 110 | 191.17 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 15 |
| 119 | 191.42 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 139 | 191.80 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 141 | 191.88 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 169 | 192.50 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 170 | 192.54 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 180 | 192.81 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 11 |
| 235 | 194.13 | temperature | 25 | 720 | < th | dose dependent | sin | 13 | NA |
| 245 | 194.34 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 19 |
| 352 | 196.65 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 22 |
| 364 | 197.06 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 22 |
| 459 | 199.48 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 14 |
| 517 | 200.46 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 544 | 200.96 | temperature | 25 | 10 | < th | dose dependent | rect. | 24 | 12 |
| 563 | 201.26 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 18 |
| 570 | 201.39 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 20 |
| 586 | 201.70 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 22 |
| 592 | 201.73 | humidity | 80 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 624 | 202.22 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 6 |
| 634 | 202.35 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 676 | 202.90 | humidity | 70 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 684 | 203.06 | temperature | 10 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 685 | 203.06 | temperature | 20 | 270 | < th | dose independent | rect. | 17 | 22 |
| 733 | 203.59 | humidity | 70 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 737 | 203.62 | humidity | 60 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 740 | 203.63 | humidity | 60 | 43200 | < th | dose dependent | rect. | 6 | 8 |
| 744 | 203.67 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 748 | 203.72 | temperature | 20 | 270 | < th | dose independent | sin | 6 | NA |
| 844 | 204.26 | humidity | 50 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 848 | 204.30 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 885 | 204.58 | temperature | 20 | 270 | > th | dose independent | sin | 5 | NA |
| 912 | 204.72 | temperature | 20 | 10 | > th | dose independent | rect. | 2 | 18 |
| 940 | 204.88 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 978 | 205.07 | humidity | 50 | 43200 | > th | dose independent | rect. | 6 | 6 |
| 980 | 205.07 | humidity | 60 | 43200 | < th | dose dependent | sin | 5 | NA |