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Os08g0465700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.98 (0.041) R2 : 0.603
β1 : 1.31 (0.15) R2dD : 0.0688 R2D : 0.0659
β2 : 3.77 (0.187) R2dC : 1.24 R2C : -1.22
β3 : 5.88 (0.249) R2dE : 1.7 R2E : -0.752
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.508 (0.0877) R2dN8 : 0.0394 R2N8 : 0.0585
σ : 0.767
deviance : 271.21
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_____
C
peak time of C : 14.4
E
wheather : radiation
threshold : 3.67
memory length : 791
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 10.5
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
263.42 0.763 9.98 1.26 3.73 5.73 1.28 -0.305 -0.519 14.2 4.174 789 10.6 --
263.34 0.756 9.99 1.23 3.7 5.72 1.45 -- -0.53 14.3 4.138 791 10.5 --
265.26 0.759 9.97 1.35 3.7 5.7 -- -1.87 -0.505 13.9 4.064 790 11.1 --
271.21 0.767 9.98 1.31 3.77 5.88 -- -- -0.508 14.4 3.67 791 10.5 --
319.78 0.833 9.97 1.22 -- 3.23 -- 1.5 -0.426 -- 4.713 1152 9.2 --
328.6 0.85 9.96 1.13 2.23 -- 0.288 -- -0.641 8.12 -- -- -- --
328.84 0.849 9.96 1.14 2.24 -- -- -- -0.641 8.1 -- -- -- --
306.95 0.816 9.97 1.2 -- 2.96 -- -- -0.405 -- 54.34 1226 8.59 --
314.06 0.825 10 -- 3.71 5.8 -- -- -0.657 14.6 5.002 787 9.96 --
603.04 1.15 10 1.16 -- -- -- -- -0.614 -- -- -- -- --
362.87 0.891 9.99 -- 2.24 -- -- -- -0.768 8.06 -- -- -- --
343.78 0.864 10 -- -- 2.89 -- -- -0.575 -- 70.61 1238 8.67 --
638.28 1.18 10 -- -- -- -- -- -0.742 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 273.44 radiation 1.0 720 > th dose independent rect. 15 3
2 273.84 radiation 20.0 1440 > th dose independent rect. 16 15
3 274.13 radiation 1.0 720 < th dose independent sin 16 NA
5 274.63 radiation 1.0 720 > th dose independent rect. 15 14
6 274.72 radiation 1.0 720 > th dose independent rect. 7 11
7 274.80 radiation 1.0 720 > th dose independent sin 15 NA
18 275.03 radiation 20.0 1440 > th dose independent rect. 16 1
34 275.48 radiation 1.0 720 > th dose independent rect. 7 22
45 275.89 radiation 40.0 10 < th dose dependent rect. 19 16
46 276.00 radiation 1.0 720 < th dose independent rect. 14 8
49 276.51 radiation 30.0 30 < th dose independent rect. 19 16
54 276.96 radiation 1.0 720 > th dose independent rect. 13 16
55 277.12 radiation 1.0 720 > th dose independent rect. 13 6
68 278.04 radiation 1.0 720 < th dose dependent sin 16 NA
69 278.10 radiation 1.0 720 > th dose independent sin 21 NA
71 278.27 radiation 40.0 10 < th dose dependent rect. 19 14
72 278.31 radiation 1.0 720 < th dose independent rect. 13 16
90 278.75 radiation 1.0 720 < th dose independent rect. 11 11
96 278.95 radiation 1.0 720 < th dose dependent rect. 14 8
99 279.03 radiation 1.0 720 < th dose independent rect. 9 20
100 279.08 wind 7.0 4320 < th dose independent rect. 15 1
104 279.17 wind 7.0 4320 > th dose independent rect. 15 1
114 279.60 humidity 50.0 720 > th dose dependent rect. 19 1
116 279.66 wind 1.0 30 > th dose independent rect. 19 14
118 279.72 radiation 30.0 30 < th dose independent rect. 19 14
133 280.43 radiation 10.0 720 < th dose dependent rect. 14 16
139 280.82 temperature 10.0 30 > th dose independent rect. 9 10
141 280.82 atmosphere 1015.0 30 < th dose independent rect. 9 10
142 280.82 temperature 10.0 30 > th dose independent rect. 19 14
143 280.82 temperature 30.0 30 < th dose independent rect. 19 14
144 280.82 humidity 50.0 30 > th dose independent rect. 19 14
146 280.82 atmosphere 995.0 30 > th dose independent rect. 19 14
154 281.23 precipitation 0.1 30 < th dose independent rect. 9 10
156 281.23 precipitation 0.1 30 < th dose dependent rect. 9 10
160 281.33 wind 9.0 30 < th dose independent rect. 19 14
176 281.55 radiation 1.0 720 < th dose dependent rect. 11 11
179 281.65 radiation 1.0 720 < th dose dependent rect. 9 20
189 282.07 wind 5.0 4320 > th dose dependent rect. 15 1
190 282.09 humidity 70.0 720 > th dose independent rect. 19 1
195 282.23 atmosphere 995.0 30 > th dose independent rect. 9 10
226 282.79 radiation 10.0 30 < th dose dependent rect. 22 21
228 282.85 radiation 1.0 720 > th dose independent rect. 9 9
230 282.87 humidity 50.0 30 > th dose dependent rect. 19 16
233 282.93 wind 1.0 30 > th dose independent rect. 9 10
248 283.32 temperature 30.0 30 < th dose independent rect. 19 16
264 283.52 radiation 1.0 720 > th dose independent rect. 9 20
284 283.75 wind 5.0 4320 > th dose dependent rect. 13 3
289 284.04 radiation 1.0 720 > th dose independent rect. 11 18
295 284.19 radiation 1.0 720 > th dose independent rect. 11 8
305 284.21 precipitation 0.1 30 < th dose independent rect. 19 14
306 284.21 precipitation 0.1 30 < th dose dependent rect. 19 14
308 284.24 humidity 60.0 30 > th dose independent rect. 19 16
309 284.29 radiation 20.0 1440 < th dose independent rect. 16 1
372 285.25 radiation 1.0 720 < th dose independent rect. 3 23
374 285.40 radiation 1.0 720 < th dose independent rect. 1 23
375 285.41 radiation 1.0 720 > th dose independent rect. 13 23
385 285.62 atmosphere 1015.0 30 < th dose dependent rect. 19 7
389 285.69 wind 7.0 4320 < th dose independent rect. 13 6
393 285.77 radiation 1.0 720 < th dose independent rect. 19 23
410 286.10 wind 7.0 4320 > th dose independent rect. 13 6
412 286.13 radiation 1.0 720 > th dose independent rect. 15 23
428 286.32 wind 1.0 30 > th dose independent rect. 19 16
462 286.86 radiation 20.0 1440 < th dose independent rect. 16 7
481 286.92 radiation 1.0 720 > th dose independent rect. 11 23
495 287.06 radiation 20.0 1440 < th dose independent rect. 16 9
498 287.08 wind 5.0 4320 > th dose dependent rect. 13 6
505 287.17 radiation 20.0 1440 < th dose independent rect. 16 11
511 287.24 radiation 1.0 720 < th dose independent rect. 23 23
558 287.52 humidity 50.0 720 > th dose dependent rect. 19 3
571 287.71 atmosphere 1015.0 270 < th dose dependent rect. 19 1
572 287.72 radiation 1.0 720 < th dose independent rect. 3 21
576 287.75 temperature 10.0 1440 > th dose independent rect. 10 10
579 287.75 temperature 10.0 1440 > th dose independent rect. 20 14
582 287.75 atmosphere 995.0 1440 > th dose independent rect. 20 14
596 287.92 wind 9.0 30 < th dose independent rect. 9 10
603 287.97 atmosphere 1015.0 30 < th dose dependent rect. 19 3
607 288.02 radiation 10.0 1440 > th dose dependent rect. 16 1
615 288.07 atmosphere 1015.0 30 < th dose dependent rect. 19 14
648 288.33 temperature 10.0 30 > th dose independent rect. 11 8
650 288.33 atmosphere 1015.0 30 < th dose independent rect. 11 8
651 288.33 temperature 10.0 30 > th dose independent rect. 19 16
653 288.33 atmosphere 995.0 30 > th dose independent rect. 19 16
654 288.33 radiation 1.0 720 < th dose independent rect. 13 23
661 288.37 radiation 1.0 720 < th dose independent no NA NA
662 288.37 humidity 50.0 30 > th dose dependent rect. 19 14
666 288.46 radiation 20.0 720 < th dose independent rect. 15 16
669 288.47 radiation 1.0 720 < th dose independent rect. 3 19
671 288.52 radiation 1.0 720 > th dose independent no NA NA
672 288.52 radiation 1.0 720 > th dose independent rect. 4 15
726 288.61 precipitation 0.1 30 < th dose independent rect. 11 8
727 288.61 precipitation 0.1 30 < th dose dependent rect. 11 8
732 288.67 wind 9.0 30 < th dose independent rect. 19 16
751 288.76 atmosphere 995.0 30 > th dose independent rect. 11 8
757 288.86 radiation 40.0 1440 < th dose dependent rect. 16 1
758 288.86 atmosphere 1015.0 30 < th dose dependent rect. 19 5
764 288.99 temperature 25.0 90 < th dose independent rect. 18 5
811 289.32 wind 1.0 30 > th dose independent rect. 11 8
825 289.44 radiation 1.0 720 < th dose dependent rect. 3 23
827 289.47 humidity 80.0 720 < th dose independent rect. 15 4
829 289.47 radiation 1.0 720 < th dose dependent rect. 1 23
833 289.51 radiation 1.0 720 < th dose independent rect. 21 23
846 289.62 radiation 10.0 30 < th dose independent rect. 22 21
860 289.73 radiation 1.0 720 < th dose dependent rect. 19 23
868 289.79 radiation 20.0 1440 > th dose dependent rect. 16 15
876 289.89 humidity 50.0 4320 > th dose independent rect. 20 14
893 290.01 atmosphere 1015.0 30 < th dose independent rect. 19 14
901 290.02 humidity 70.0 720 > th dose independent rect. 19 10
910 290.06 wind 1.0 720 > th dose independent rect. 15 8
916 290.10 wind 7.0 4320 < th dose independent rect. 3 16
917 290.11 radiation 1.0 720 > th dose independent rect. 15 21
923 290.17 temperature 25.0 10 < th dose independent rect. 19 7
938 290.19 wind 7.0 4320 < th dose independent rect. 24 19
960 290.32 atmosphere 995.0 30 > th dose independent rect. 22 21
970 290.42 temperature 10.0 30 > th dose independent rect. 19 3
972 290.42 temperature 30.0 30 < th dose independent rect. 19 3
973 290.42 humidity 50.0 30 > th dose independent rect. 19 3
975 290.42 atmosphere 995.0 30 > th dose independent rect. 19 3
976 290.42 atmosphere 1010.0 30 < th dose independent rect. 19 3
978 290.42 radiation 1.0 30 < th dose independent rect. 19 3
984 290.42 temperature 10.0 30 > th dose independent rect. 22 21
985 290.42 radiation 10.0 30 < th dose dependent rect. 19 3
993 290.48 radiation 1.0 720 > th dose independent rect. 15 19
996 290.49 temperature 25.0 270 > th dose independent rect. 13 12
998 290.50 precipitation 0.1 30 < th dose independent rect. 19 16
999 290.50 precipitation 0.1 30 < th dose dependent rect. 19 16