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Os08g0464000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Activator of Hsp90 ATPase homologue 1-like family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.7 (0.0192) R2 : 0.587
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.16 (0.0459) R2dC : 0.581 R2C : 0.575
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.127 (0.0405) R2dN8 : 0.0116 R2N8 : 0.00585
σ : 0.363
deviance : 60.11
__
_____
C
peak time of C : 11.2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
41.28 0.302 12.7 0.143 0.334 -0.925 0.31 -0.834 0.0729 6.98 8.2 60 -- --
43.3 0.306 12.7 0.118 0.362 -0.786 0.995 -- 0.0743 9.23 8.192 49 -- --
41.49 0.3 12.7 0.145 0.353 -0.897 -- -0.883 0.0707 7.29 8.242 62 -- --
46.26 0.317 12.7 0.154 0.331 -0.915 -- -- 0.0733 7.11 8.032 62 -- --
45.61 0.316 12.7 0.138 -- -0.976 -- -0.804 0.119 -- 8.55 36 -- --
55.99 0.351 12.6 0.11 1.17 -- 0.91 -- 0.14 11.2 -- -- -- --
59.54 0.361 12.6 0.147 1.16 -- -- -- 0.144 11.2 -- -- -- --
49.58 0.329 12.7 0.155 -- -0.977 -- -- 0.122 -- 8.55 36 -- --
46.91 0.319 12.7 -- 0.336 -0.911 -- -- 0.0581 7.16 7.96 63 -- --
143.85 0.56 12.7 0.119 -- -- -- -- 0.133 -- -- -- -- --
60.11 0.363 12.7 -- 1.16 -- -- -- 0.127 11.2 -- -- -- --
50.21 0.331 12.7 -- -- -0.976 -- -- 0.104 -- 8.55 36 -- --
144.22 0.561 12.7 -- -- -- -- -- 0.12 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 34.65 temperature 10.0 10 > th dose dependent rect. 6 20
20 38.83 radiation 10.0 90 < th dose dependent rect. 1 13
21 38.87 radiation 1.0 90 < th dose independent sin 3 NA
22 38.90 radiation 10.0 30 < th dose dependent sin 3 NA
24 38.96 radiation 1.0 90 > th dose independent sin 3 NA
25 39.01 radiation 10.0 90 < th dose dependent sin 5 NA
65 40.41 radiation 20.0 10 < th dose dependent rect. 13 17
74 40.63 radiation 1.0 90 < th dose independent rect. 2 14
83 40.79 temperature 30.0 10 < th dose dependent rect. 2 15
95 40.93 radiation 20.0 10 < th dose dependent rect. 10 20
133 41.40 radiation 10.0 90 < th dose dependent rect. 7 23
145 41.48 temperature 20.0 10 > th dose independent rect. 6 20
156 41.57 atmosphere 1015.0 10 < th dose independent rect. 6 20
210 41.95 temperature 30.0 10 < th dose dependent rect. 2 4
218 42.01 temperature 10.0 90 > th dose dependent rect. 21 14
263 42.21 temperature 30.0 270 < th dose dependent rect. 1 2
266 42.22 humidity 80.0 10 > th dose dependent rect. 2 14
276 42.27 radiation 30.0 10 < th dose dependent rect. 2 4
318 42.43 wind 9.0 10 < th dose independent rect. 2 4
319 42.43 temperature 10.0 10 > th dose independent rect. 2 4
321 42.43 temperature 30.0 10 < th dose independent rect. 2 4
322 42.43 humidity 50.0 10 > th dose independent rect. 2 4
325 42.43 atmosphere 995.0 10 > th dose independent rect. 2 4
326 42.43 atmosphere 1010.0 10 < th dose independent rect. 2 4
328 42.43 radiation 20.0 10 < th dose independent rect. 2 4
331 42.43 temperature 10.0 10 > th dose independent rect. 6 20
339 42.47 wind 9.0 10 < th dose independent rect. 6 20
363 42.52 temperature 15.0 90 > th dose dependent rect. 5 6
365 42.52 radiation 10.0 90 < th dose dependent rect. 15 23
380 42.57 precipitation 0.1 30 < th dose independent rect. 2 4
381 42.57 precipitation 0.1 30 < th dose dependent rect. 2 4
384 42.58 precipitation 0.1 270 < th dose independent rect. 1 2
385 42.58 precipitation 0.1 270 < th dose dependent rect. 1 2
390 42.59 wind 7.0 270 < th dose independent rect. 1 2
395 42.60 temperature 10.0 270 > th dose independent rect. 1 2
397 42.60 temperature 30.0 270 < th dose independent rect. 1 2
398 42.60 humidity 50.0 270 > th dose independent rect. 1 2
401 42.60 atmosphere 995.0 270 > th dose independent rect. 1 2
402 42.60 atmosphere 1010.0 270 < th dose independent rect. 1 2
404 42.60 radiation 1.0 270 < th dose independent rect. 1 2
424 42.60 temperature 10.0 270 > th dose independent rect. 3 22
425 42.60 radiation 1.0 270 < th dose dependent rect. 1 2
449 42.63 precipitation 0.1 10 < th dose independent rect. 6 20
453 42.63 precipitation 0.1 10 < th dose dependent rect. 6 20
454 42.63 radiation 10.0 30 < th dose dependent rect. 13 23
455 42.64 radiation 10.0 30 < th dose dependent no NA NA
467 42.66 precipitation 0.1 90 < th dose independent rect. 6 19
468 42.66 precipitation 0.1 90 < th dose dependent rect. 6 19
487 42.72 wind 9.0 1440 < th dose independent rect. 3 4
488 42.72 temperature 10.0 1440 > th dose independent rect. 3 4
491 42.72 temperature 30.0 1440 < th dose independent rect. 3 4
495 42.72 humidity 50.0 1440 > th dose independent rect. 3 4
500 42.72 atmosphere 995.0 1440 > th dose independent rect. 3 4
501 42.72 radiation 40.0 1440 < th dose independent rect. 3 4
505 42.72 temperature 10.0 1440 > th dose independent rect. 7 20
544 42.80 radiation 10.0 90 < th dose dependent rect. 17 23
566 42.88 atmosphere 1015.0 270 < th dose independent rect. 4 20
573 42.90 humidity 90.0 10 < th dose independent rect. 6 10
605 42.96 wind 1.0 270 > th dose independent rect. 1 2
631 42.99 wind 9.0 90 < th dose dependent rect. 6 11
688 43.09 atmosphere 995.0 10 > th dose dependent rect. 3 3
690 43.09 temperature 15.0 10 > th dose dependent rect. 6 6
694 43.09 radiation 10.0 30 < th dose dependent rect. 1 23
705 43.12 atmosphere 1015.0 1440 < th dose independent rect. 3 4
724 43.18 humidity 50.0 10 > th dose dependent rect. 2 4
732 43.20 wind 9.0 270 < th dose independent rect. 3 22
738 43.21 temperature 25.0 30 > th dose independent sin 6 NA
743 43.22 wind 9.0 10 < th dose dependent rect. 2 4
748 43.24 temperature 25.0 30 < th dose independent rect. 3 13
756 43.27 precipitation 0.1 270 < th dose independent rect. 3 22
758 43.27 precipitation 0.1 270 < th dose dependent rect. 3 22
765 43.30 humidity 90.0 10 < th dose independent rect. 6 12
769 43.32 wind 9.0 90 < th dose dependent rect. 6 19
781 43.35 wind 1.0 270 > th dose independent rect. 9 10
782 43.35 wind 9.0 270 < th dose dependent rect. 1 2
786 43.36 temperature 30.0 10 < th dose dependent sin 5 NA
789 43.36 humidity 50.0 10 > th dose dependent rect. 2 13
793 43.37 humidity 50.0 270 > th dose dependent rect. 1 2
796 43.37 radiation 10.0 90 < th dose dependent rect. 21 23
797 43.38 temperature 25.0 30 < th dose independent sin 6 NA
822 43.42 temperature 25.0 30 > th dose independent rect. 21 14
872 43.49 temperature 15.0 10 > th dose dependent sin 5 NA
884 43.53 temperature 25.0 30 > th dose independent rect. 6 5
922 43.56 radiation 10.0 90 < th dose dependent rect. 23 22
924 43.57 radiation 1.0 90 > th dose independent rect. 6 5
927 43.57 temperature 10.0 10 > th dose dependent rect. 6 10
960 43.63 humidity 90.0 10 < th dose independent rect. 6 8
990 43.70 wind 7.0 90 < th dose dependent rect. 6 5