Os08g0459700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Adenosine diphosphate glucose pyrophosphatase precursor.
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Os08g0459700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Adenosine diphosphate glucose pyrophosphatase precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.95 | 0.527 | 5.23 | 0.683 | 0.512 | 1.36 | 0.0802 | 0.623 | -0.238 | 10.5 | 22.1 | 1931 | -- | -- |
| 126.63 | 0.524 | 5.21 | 0.863 | 0.522 | 1.33 | 0.117 | -- | -0.187 | 10.4 | 22.3 | 1881 | -- | -- |
| 125.78 | 0.522 | 5.23 | 0.681 | 0.528 | 1.36 | -- | 0.645 | -0.233 | 10.5 | 22.11 | 1855 | -- | -- |
| 126.68 | 0.524 | 5.21 | 0.867 | 0.523 | 1.32 | -- | -- | -0.187 | 10.5 | 22.28 | 1881 | -- | -- |
| 140.73 | 0.553 | 5.24 | 0.71 | -- | 1.39 | -- | 0.562 | -0.207 | -- | 22.27 | 2098 | -- | -- |
| 191.84 | 0.649 | 5.31 | 0.339 | 0.572 | -- | 0.0865 | -- | -0.647 | 10.4 | -- | -- | -- | -- |
| 191.87 | 0.649 | 5.31 | 0.343 | 0.571 | -- | -- | -- | -0.646 | 10.4 | -- | -- | -- | -- |
| 141.45 | 0.554 | 5.22 | 0.896 | -- | 1.39 | -- | -- | -0.161 | -- | 22.3 | 2108 | -- | -- |
| 143.49 | 0.558 | 5.24 | -- | 0.538 | 1.15 | -- | -- | -0.33 | 9.83 | 22.4 | 1408 | -- | -- |
| 211.86 | 0.68 | 5.33 | 0.333 | -- | -- | -- | -- | -0.648 | -- | -- | -- | -- | -- |
| 194.97 | 0.653 | 5.32 | -- | 0.569 | -- | -- | -- | -0.685 | 10.4 | -- | -- | -- | -- |
| 147.84 | 0.566 | 5.26 | -- | -- | 1.15 | -- | -- | -0.331 | -- | 22.38 | 841 | -- | -- |
| 214.79 | 0.684 | 5.34 | -- | -- | -- | -- | -- | -0.685 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.78 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 5 | 127.17 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 20 |
| 19 | 128.03 | temperature | 25 | 720 | < th | dose dependent | rect. | 14 | 17 |
| 53 | 128.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 62 | 129.11 | temperature | 25 | 720 | < th | dose dependent | sin | 14 | NA |
| 74 | 129.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 98 | 129.65 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 100 | 129.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 221 | 130.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 234 | 130.88 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 250 | 131.06 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 320 | 131.78 | temperature | 10 | 720 | > th | dose dependent | sin | 12 | NA |
| 344 | 131.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 3 |
| 397 | 132.38 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 474 | 132.82 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 484 | 132.85 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 492 | 132.90 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 531 | 133.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 7 |
| 900 | 134.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 920 | 134.41 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 997 | 134.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |