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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0456200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Elicitor-inducible cytochrome P450.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.49 (0.0495) R2 : 0.103
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.03 (0.179) R2dE : 0.0679 R2E : 0.0493
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.471 (0.104) R2dN8 : 0.0536 R2N8 : 0.0351
σ : 0.931
deviance : 399.2
__
_____
C
peak time of C : --
E
wheather : atmosphere
threshold : 1005
memory length : 41
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 16.8
open length of G : 3.17

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
389.32 0.927 3.47 0.383 0.4 1.25 0.385 0.00706 -0.46 7.54 1005 62 16.6 3.37
389.18 0.919 3.47 0.384 0.4 1.25 0.389 -- -0.458 7.55 1005 60 16.6 3.37
389.64 0.919 3.47 0.396 0.397 1.25 -- -0.203 -0.457 7.61 1005 61 16.6 3.37
389.6 0.919 3.47 0.392 0.397 1.24 -- -- -0.458 7.62 1005 60 16.6 3.38
394.92 0.926 3.48 0.404 -- 1.1 -- -0.243 -0.428 -- 1005 38 16.9 3.48
423.42 0.965 3.47 0.461 0.0804 -- -0.198 -- -0.388 14.9 -- -- -- --
423.51 0.964 3.47 0.456 0.0814 -- -- -- -0.389 13.7 -- -- -- --
394.8 0.925 3.48 0.401 -- 1.02 -- -- -0.434 -- 1005 38 16.8 3.24
392.89 0.923 3.48 -- 0.417 1.25 -- -- -0.498 7.53 1005 50 16.7 3.49
423.92 0.962 3.47 0.453 -- -- -- -- -0.391 -- -- -- -- --
429 0.969 3.48 -- 0.0732 -- -- -- -0.44 13.5 -- -- -- --
399.2 0.931 3.49 -- -- 1.03 -- -- -0.471 -- 1005 41 16.8 3.17
429.33 0.967 3.48 -- -- -- -- -- -0.441 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 394.20 atmosphere 1005.0 90 > th dose independent rect. 16 4
2 395.07 wind 7.0 90 > th dose dependent rect. 3 6
5 397.30 wind 7.0 90 > th dose dependent rect. 8 1
10 397.63 wind 7.0 90 > th dose independent rect. 8 1
11 397.98 wind 5.0 10 > th dose independent rect. 18 2
12 398.26 atmosphere 1005.0 90 > th dose independent rect. 16 6
16 398.61 wind 5.0 10 > th dose independent rect. 10 1
20 398.61 wind 5.0 10 > th dose dependent rect. 10 1
25 398.77 wind 7.0 90 > th dose dependent rect. 2 8
26 398.82 wind 3.0 30 > th dose dependent rect. 19 1
27 399.06 atmosphere 1005.0 30 > th dose independent rect. 14 9
30 399.20 atmosphere 995.0 4320 > th dose independent rect. 19 5
72 401.06 humidity 90.0 90 > th dose independent rect. 8 1
81 401.38 wind 9.0 90 > th dose dependent rect. 21 13
82 401.41 wind 9.0 90 > th dose dependent rect. 19 15
87 401.53 humidity 90.0 90 > th dose dependent rect. 8 2
88 401.54 atmosphere 1005.0 10 > th dose dependent rect. 17 3
96 402.10 temperature 30.0 30 < th dose independent rect. 16 4
106 402.48 atmosphere 995.0 4320 > th dose independent rect. 3 9
117 403.07 temperature 30.0 30 < th dose independent rect. 14 9
122 403.36 temperature 30.0 30 < th dose independent rect. 16 7
125 403.38 atmosphere 995.0 4320 > th dose independent rect. 19 17
142 403.83 temperature 30.0 30 < th dose independent rect. 14 6
159 404.49 wind 7.0 90 > th dose independent rect. 24 10
164 404.75 wind 7.0 30 > th dose dependent rect. 19 1
169 404.84 atmosphere 1005.0 90 > th dose dependent rect. 17 1
171 404.96 atmosphere 1000.0 270 > th dose dependent rect. 16 3
189 405.39 atmosphere 1000.0 270 > th dose dependent rect. 15 5
203 405.65 wind 1.0 270 > th dose independent rect. 20 19
214 405.89 atmosphere 995.0 4320 > th dose independent rect. 19 12
219 405.93 atmosphere 1005.0 10 > th dose dependent rect. 14 6
229 406.11 wind 3.0 270 > th dose dependent rect. 6 2
241 406.43 temperature 30.0 30 < th dose independent rect. 16 14
243 406.46 atmosphere 1005.0 30 > th dose independent rect. 19 1
251 406.60 wind 5.0 10 > th dose independent rect. 18 5
252 406.60 atmosphere 1000.0 30 > th dose dependent rect. 14 9
256 406.64 radiation 1.0 10 < th dose independent rect. 17 3
262 406.67 humidity 60.0 90 > th dose independent rect. 16 4
267 406.77 radiation 1.0 10 < th dose dependent rect. 17 3
278 406.93 temperature 30.0 30 < th dose independent rect. 23 15
284 406.99 radiation 1.0 10 < th dose independent rect. 7 13
297 407.13 atmosphere 995.0 4320 > th dose independent rect. 19 14
298 407.13 temperature 30.0 270 < th dose dependent rect. 16 1
318 407.32 radiation 1.0 30 < th dose independent rect. 5 18
321 407.33 atmosphere 1000.0 10 > th dose dependent rect. 16 7
326 407.39 humidity 60.0 30 > th dose independent rect. 16 7
331 407.42 humidity 70.0 90 < th dose dependent rect. 19 14
332 407.48 temperature 20.0 90 < th dose independent rect. 16 3
336 407.51 radiation 1.0 10 < th dose dependent rect. 7 13
339 407.57 wind 1.0 10 < th dose independent rect. 14 8
348 407.67 temperature 20.0 90 < th dose dependent rect. 16 3
349 407.69 radiation 1.0 10 < th dose independent rect. 7 16
356 407.71 wind 1.0 270 > th dose independent rect. 7 10
371 407.87 humidity 60.0 30 > th dose independent rect. 14 9
391 408.04 wind 1.0 10 < th dose dependent rect. 14 8
401 408.18 humidity 70.0 90 < th dose independent rect. 19 14
404 408.20 temperature 30.0 30 < th dose independent rect. 16 19
409 408.21 radiation 10.0 90 < th dose dependent rect. 17 17
421 408.34 radiation 1.0 10 < th dose dependent rect. 7 16
430 408.41 wind 1.0 90 < th dose dependent rect. 8 2
433 408.43 radiation 1.0 10 < th dose independent rect. 16 7
435 408.44 atmosphere 1005.0 10 > th dose independent rect. 17 1
436 408.44 wind 1.0 10 < th dose independent rect. 17 5
443 408.47 atmosphere 1005.0 90 > th dose independent rect. 16 16
453 408.54 humidity 60.0 30 > th dose independent rect. 16 19
461 408.60 radiation 1.0 10 < th dose dependent rect. 15 8
480 408.67 radiation 1.0 10 < th dose dependent rect. 17 6
494 408.77 humidity 70.0 90 < th dose independent rect. 19 1
509 408.80 wind 1.0 10 < th dose dependent rect. 17 5
514 408.86 atmosphere 1005.0 90 > th dose independent rect. 16 14
516 408.88 wind 1.0 10 < th dose independent rect. 21 1
521 408.88 wind 1.0 10 < th dose dependent rect. 21 1
526 408.92 radiation 1.0 30 > th dose independent sin 22 NA
531 408.95 temperature 20.0 90 < th dose dependent rect. 12 7
533 408.96 temperature 30.0 10 < th dose dependent rect. 16 4
552 409.14 radiation 1.0 10 < th dose dependent sin 21 NA
559 409.17 humidity 50.0 14400 > th dose independent rect. 19 2
561 409.17 radiation 1.0 30 > th dose independent rect. 6 13
573 409.18 temperature 30.0 30 < th dose independent rect. 20 18
574 409.18 humidity 90.0 10 > th dose independent rect. 4 19
586 409.23 atmosphere 995.0 4320 > th dose independent rect. 3 4
592 409.26 radiation 1.0 30 < th dose independent sin 22 NA
612 409.30 precipitation 0.1 10 > th dose independent rect. 19 1
629 409.30 precipitation 0.1 10 > th dose dependent rect. 19 1
641 409.31 wind 1.0 720 > th dose independent rect. 6 13
643 409.31 humidity 70.0 90 < th dose dependent rect. 19 1
656 409.32 radiation 1.0 10 > th dose independent rect. 11 8
671 409.35 radiation 1.0 4320 < th dose dependent rect. 19 2
672 409.36 wind 9.0 4320 < th dose independent rect. 23 4
673 409.37 radiation 20.0 10 < th dose independent rect. 19 13
715 409.65 humidity 90.0 10 > th dose independent rect. 3 2
772 409.87 humidity 60.0 30 > th dose independent rect. 14 6
797 409.92 humidity 60.0 1440 > th dose independent rect. 19 2
799 409.92 radiation 1.0 270 < th dose independent rect. 6 13
810 409.97 wind 1.0 270 > th dose independent rect. 4 11
828 410.05 temperature 30.0 30 < th dose independent rect. 14 21
836 410.11 humidity 90.0 30 > th dose dependent rect. 4 19
838 410.12 wind 9.0 4320 < th dose independent rect. 22 12
863 410.22 atmosphere 1005.0 30 > th dose independent rect. 14 18
874 410.25 atmosphere 1005.0 30 > th dose independent rect. 14 16
875 410.26 temperature 15.0 1440 > th dose independent rect. 19 2
883 410.27 temperature 30.0 1440 < th dose independent rect. 19 2
893 410.27 radiation 1.0 1440 < th dose independent rect. 19 2
914 410.27 temperature 10.0 1440 > th dose independent rect. 21 22
924 410.28 radiation 20.0 90 < th dose independent rect. 20 20
936 410.32 radiation 30.0 270 < th dose independent rect. 15 5
945 410.34 atmosphere 995.0 4320 > th dose independent rect. 22 14
964 410.35 radiation 30.0 30 < th dose dependent rect. 19 14
967 410.37 radiation 1.0 90 < th dose dependent rect. 18 1
969 410.38 humidity 60.0 90 > th dose independent rect. 16 14
993 410.43 wind 1.0 10 > th dose independent rect. 11 8