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Os08g0454700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.11 (0.0345) R2 : 0.869
β1 : 0.9 (0.126) R2dD : 0.0151 R2D : 0.00757
β2 : 2.3 (0.0958) R2dC : 0.189 R2C : 0.385
β3 : 2.96 (0.0784) R2dE : 0.463 R2E : 0.664
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.437 (0.0735) R2dN8 : 0.0132 R2N8 : 0.000328
σ : 0.644
deviance : 191.27
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_____
C
peak time of C : 17.8
E
wheather : radiation
threshold : 1.8
memory length : 239
response mode : > th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 19.4
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
180.6 0.631 7.12 0.905 2.28 2.96 2.09 0.0844 0.423 17.8 1.715 252 19.6 --
180.5 0.626 7.12 0.913 2.3 2.93 2.12 -- 0.426 17.7 1.72 247 19.6 --
190.36 0.643 7.12 0.885 2.26 2.97 -- 0.501 0.43 17.8 1.67 247 19.5 --
191.27 0.644 7.11 0.9 2.3 2.96 -- -- 0.437 17.8 1.8 239 19.4 --
232.86 0.711 7.08 0.857 -- 4.45 -- 1.56 0.427 -- -0.2675 550 19.4 --
230.8 0.712 7.09 0.968 4.58 -- 1.61 -- 0.44 15.1 -- -- -- --
239.26 0.724 7.08 1 4.59 -- -- -- 0.45 15.1 -- -- -- --
239.26 0.72 7.06 1 -- 4.59 -- -- 0.45 -- -1.682 552 19.5 --
212.97 0.68 7.12 -- 2.36 2.95 -- -- 0.389 17.8 1.666 242 19.6 --
1441.62 1.77 7.09 0.807 -- -- -- -- 0.33 -- -- -- -- --
265.73 0.763 7.1 -- 4.57 -- -- -- 0.338 15.1 -- -- -- --
248.35 0.734 7.06 -- -- 4.45 -- -- 0.314 -- 0.13 463 19.4 --
1458.78 1.78 7.11 -- -- -- -- -- 0.241 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 166.90 radiation 40.0 270 < th dose dependent rect. 15 15
2 167.81 temperature 10.0 90 > th dose dependent rect. 22 5
4 168.13 temperature 10.0 270 > th dose dependent rect. 20 6
12 170.95 temperature 15.0 270 > th dose dependent rect. 22 2
14 171.30 radiation 20.0 270 < th dose independent rect. 15 15
20 172.35 temperature 20.0 270 > th dose independent rect. 21 4
21 172.69 temperature 20.0 270 > th dose independent rect. 20 6
23 173.23 precipitation 0.1 270 < th dose independent rect. 6 10
24 173.23 precipitation 0.1 270 < th dose dependent rect. 6 10
25 173.34 wind 9.0 270 < th dose independent rect. 6 10
29 173.51 temperature 10.0 270 > th dose independent rect. 6 10
30 173.51 atmosphere 1015.0 270 < th dose independent rect. 6 10
31 173.51 temperature 10.0 270 > th dose independent rect. 16 14
33 173.66 wind 9.0 270 < th dose independent rect. 16 14
53 176.05 radiation 1.0 270 < th dose independent rect. 2 17
58 176.45 atmosphere 995.0 270 > th dose independent rect. 6 10
59 176.67 humidity 80.0 90 > th dose independent rect. 22 5
64 177.07 temperature 20.0 270 > th dose independent rect. 22 2
66 177.14 radiation 1.0 270 < th dose dependent rect. 2 18
72 177.66 precipitation 0.1 270 < th dose independent rect. 16 14
73 177.66 precipitation 0.1 270 < th dose dependent rect. 16 14
78 177.90 humidity 50.0 90 > th dose dependent rect. 21 6
79 177.93 atmosphere 995.0 270 > th dose independent rect. 16 14
100 178.89 wind 5.0 90 < th dose independent rect. 3 4
107 179.15 wind 1.0 270 > th dose independent rect. 3 2
108 179.22 temperature 20.0 10 > th dose independent rect. 22 6
109 179.29 humidity 70.0 90 > th dose independent rect. 3 4
110 179.31 temperature 15.0 90 > th dose independent rect. 7 20
114 179.41 radiation 20.0 90 < th dose independent rect. 3 4
119 179.71 temperature 30.0 90 < th dose independent rect. 22 5
120 179.71 humidity 50.0 90 > th dose independent rect. 22 5
123 179.71 atmosphere 995.0 90 > th dose independent rect. 22 5
124 179.71 radiation 1.0 90 < th dose independent rect. 22 5
129 179.71 precipitation 0.1 90 < th dose independent rect. 22 5
130 179.71 temperature 10.0 90 > th dose independent rect. 3 19
131 179.71 atmosphere 1015.0 90 < th dose independent rect. 3 19
132 179.71 radiation 1.0 90 < th dose dependent rect. 22 5
137 179.71 precipitation 0.1 90 < th dose dependent rect. 22 5
138 179.74 wind 9.0 90 < th dose independent rect. 22 5
140 179.76 wind 9.0 90 < th dose dependent rect. 22 5
147 179.87 temperature 10.0 90 > th dose independent rect. 3 4
149 179.87 temperature 30.0 90 < th dose independent rect. 3 4
150 179.87 humidity 50.0 90 > th dose independent rect. 3 4
152 179.87 atmosphere 995.0 90 > th dose independent rect. 3 4
153 179.87 atmosphere 1015.0 90 < th dose independent rect. 3 4
161 180.03 humidity 50.0 270 > th dose independent rect. 6 9
162 180.05 precipitation 0.1 90 < th dose independent rect. 3 4
163 180.05 precipitation 0.1 90 < th dose dependent rect. 3 4
164 180.08 wind 7.0 270 < th dose independent rect. 3 2
169 180.19 temperature 10.0 270 > th dose independent rect. 3 2
171 180.19 temperature 30.0 270 < th dose independent rect. 3 2
172 180.19 humidity 50.0 270 > th dose independent rect. 3 2
175 180.19 atmosphere 995.0 270 > th dose independent rect. 3 2
176 180.19 atmosphere 1010.0 270 < th dose independent rect. 3 2
178 180.19 radiation 20.0 270 < th dose independent rect. 3 2
181 180.19 temperature 10.0 270 > th dose independent rect. 5 22
182 180.19 radiation 30.0 270 < th dose dependent rect. 3 2
184 180.20 radiation 1.0 270 < th dose independent rect. 3 2
200 180.20 wind 9.0 270 < th dose independent rect. 5 22
201 180.20 radiation 10.0 270 < th dose dependent rect. 3 2
210 180.29 wind 9.0 90 < th dose independent rect. 7 20
215 180.33 humidity 50.0 270 > th dose independent rect. 16 14
219 180.41 wind 9.0 90 < th dose independent rect. 3 19
227 180.68 radiation 20.0 90 < th dose independent rect. 3 6
229 180.70 radiation 30.0 4320 < th dose dependent rect. 23 5
242 180.71 temperature 10.0 270 > th dose independent rect. 1 20
251 180.77 radiation 10.0 10 < th dose independent rect. 3 19
252 180.78 precipitation 0.1 90 < th dose independent rect. 7 20
253 180.78 precipitation 0.1 90 < th dose dependent rect. 7 20
260 180.91 radiation 30.0 90 < th dose dependent rect. 3 6
261 180.92 temperature 10.0 1440 > th dose independent rect. 23 5
264 180.92 temperature 30.0 1440 < th dose independent rect. 23 5
268 180.92 humidity 50.0 1440 > th dose independent rect. 23 5
277 180.92 atmosphere 995.0 1440 > th dose independent rect. 23 5
278 180.92 radiation 1.0 1440 < th dose independent rect. 23 5
299 180.92 temperature 10.0 1440 > th dose independent rect. 4 19
302 180.92 radiation 1.0 1440 < th dose dependent rect. 23 5
312 181.00 temperature 20.0 270 > th dose independent rect. 7 18
313 181.01 precipitation 0.1 270 < th dose independent rect. 3 2
314 181.01 precipitation 0.1 270 < th dose dependent rect. 3 2
317 181.07 radiation 1.0 270 > th dose independent rect. 6 10
318 181.07 radiation 20.0 270 < th dose dependent rect. 2 4
345 181.23 precipitation 0.1 90 < th dose independent rect. 3 19
346 181.23 precipitation 0.1 90 < th dose dependent rect. 3 19
363 181.49 atmosphere 995.0 90 > th dose independent rect. 3 19
364 181.51 precipitation 0.1 270 < th dose independent rect. 1 20
365 181.51 precipitation 0.1 270 < th dose dependent rect. 1 20
382 181.76 atmosphere 1015.0 270 < th dose independent rect. 1 20
395 181.88 atmosphere 995.0 90 > th dose dependent rect. 3 4
403 182.09 wind 9.0 270 < th dose independent rect. 1 20
458 182.47 precipitation 0.1 270 < th dose independent rect. 5 22
459 182.47 precipitation 0.1 270 < th dose dependent rect. 5 22
503 182.66 atmosphere 1015.0 90 < th dose independent rect. 22 5
508 182.70 radiation 10.0 270 < th dose independent rect. 1 6
511 182.77 wind 1.0 270 > th dose independent rect. 6 10
512 182.78 temperature 10.0 270 > th dose dependent rect. 3 2
539 182.92 wind 9.0 90 < th dose dependent rect. 3 4
575 183.43 precipitation 0.1 270 < th dose independent rect. 21 14
576 183.43 precipitation 0.1 270 < th dose dependent rect. 21 14
590 183.56 atmosphere 995.0 270 > th dose dependent rect. 3 1
591 183.56 temperature 30.0 90 < th dose dependent rect. 3 4
618 183.67 temperature 10.0 270 > th dose independent rect. 11 10
619 183.67 temperature 10.0 270 > th dose independent rect. 21 14
620 183.67 atmosphere 995.0 270 > th dose independent rect. 21 14
641 183.83 wind 9.0 270 < th dose independent rect. 21 14
643 183.85 radiation 1.0 270 > th dose independent sin 2 NA
649 183.89 precipitation 0.1 270 < th dose independent rect. 22 2
650 183.89 precipitation 0.1 270 < th dose dependent rect. 22 2
660 184.01 humidity 50.0 270 > th dose independent rect. 21 14
677 184.23 humidity 70.0 270 > th dose independent rect. 1 6
679 184.24 wind 9.0 270 < th dose dependent rect. 3 2
685 184.31 temperature 30.0 270 < th dose independent rect. 22 2
686 184.31 humidity 50.0 270 > th dose independent rect. 22 2
689 184.31 atmosphere 995.0 270 > th dose independent rect. 22 2
690 184.31 radiation 1.0 270 < th dose independent rect. 22 2
695 184.31 temperature 10.0 270 > th dose independent rect. 24 22
696 184.31 radiation 1.0 270 < th dose dependent rect. 22 2
702 184.33 radiation 20.0 10 < th dose dependent rect. 3 19
704 184.34 wind 9.0 270 < th dose independent rect. 22 2
735 184.52 atmosphere 995.0 270 > th dose independent rect. 1 20
741 184.61 humidity 50.0 270 > th dose dependent rect. 3 2
838 185.25 atmosphere 1015.0 270 < th dose independent rect. 11 10
856 185.31 humidity 70.0 10 > th dose independent rect. 3 5
890 185.46 wind 9.0 1440 < th dose independent rect. 4 4
891 185.46 temperature 10.0 1440 > th dose independent rect. 4 4
894 185.46 temperature 30.0 1440 < th dose independent rect. 4 4
898 185.46 humidity 50.0 1440 > th dose independent rect. 4 4
903 185.46 atmosphere 995.0 1440 > th dose independent rect. 4 4
904 185.46 atmosphere 1015.0 1440 < th dose independent rect. 4 4
905 185.46 temperature 10.0 1440 > th dose independent rect. 8 20
912 185.51 atmosphere 995.0 90 > th dose independent rect. 7 20
918 185.53 wind 9.0 90 < th dose dependent rect. 3 18
920 185.57 radiation 30.0 10 < th dose independent rect. 3 5
925 185.60 radiation 1.0 270 < th dose dependent sin 2 NA
931 185.65 atmosphere 1015.0 90 < th dose independent rect. 7 20
937 185.71 wind 9.0 270 < th dose independent rect. 11 10
952 185.84 wind 1.0 270 > th dose independent rect. 11 10
953 185.85 humidity 50.0 90 > th dose dependent rect. 3 4
959 185.93 radiation 10.0 10 < th dose independent rect. 3 7
963 185.98 precipitation 0.1 270 < th dose independent rect. 11 10
964 185.98 precipitation 0.1 270 < th dose dependent rect. 11 10
972 186.05 precipitation 0.1 10 < th dose independent rect. 8 19
974 186.05 precipitation 0.1 10 < th dose dependent rect. 8 19