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Os08g0454600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.75 (0.035) R2 : 0.781
β1 : 0.749 (0.129) R2dD : 0.0168 R2D : 0.0102
β2 : 4.19 (0.115) R2dC : 1.09 R2C : 0.639
β3 : 1.19 (0.104) R2dE : 0.104 R2E : -0.322
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.386 (0.0748) R2dN8 : 0.0173 R2N8 : 0.0026
σ : 0.655
deviance : 197.9
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_____
C
peak time of C : 15.6
E
wheather : temperature
threshold : 20
memory length : 120
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 21.8
open length of G : 6.2

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
190.29 0.648 6.76 0.705 4.2 1.2 1.49 -0.194 0.377 15.6 20 117 21.9 6.12
190.26 0.642 6.76 0.714 4.22 1.21 1.61 -- 0.378 15.6 19.97 121 21.9 6.13
195.62 0.651 6.75 0.708 4.16 1.2 -- -0.737 0.395 15.6 19.93 113 21.8 6.27
197.9 0.655 6.75 0.749 4.19 1.19 -- -- 0.386 15.6 20 120 21.8 6.2
329.69 0.846 6.72 1.11 -- -2.39 -- -1.73 0.473 -- 2.066 34 23.6 10
239.9 0.726 6.76 0.866 3.42 -- 1.26 -- 0.403 16 -- -- -- --
244.49 0.732 6.75 0.881 3.43 -- -- -- 0.41 16 -- -- -- --
287.63 0.79 6.67 0.933 -- -2.77 -- -- 0.755 -- 14.2 266 21.1 10.4
212.15 0.678 6.76 -- 4.22 1.27 -- -- 0.314 15.5 19.9 132 21.6 6.18
884.92 1.39 6.74 0.741 -- -- -- -- 0.319 -- -- -- -- --
264.96 0.761 6.77 -- 3.41 -- -- -- 0.312 16 -- -- -- --
264.02 0.757 6.76 -- -- -3.24 -- -- 0.256 -- -15.71 757 17.6 7.9
899.42 1.4 6.76 -- -- -- -- -- 0.237 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 192.01 temperature 10.0 270 > th dose dependent rect. 21 5
4 193.48 temperature 20.0 90 > th dose independent rect. 22 6
8 195.49 temperature 15.0 10 > th dose dependent rect. 23 6
17 196.99 temperature 20.0 10 > th dose independent rect. 23 6
20 197.26 humidity 60.0 270 > th dose dependent rect. 21 5
24 197.58 temperature 10.0 270 > th dose dependent rect. 22 3
43 199.82 wind 9.0 270 < th dose dependent rect. 21 5
45 200.07 humidity 60.0 270 > th dose dependent rect. 22 3
47 200.12 temperature 20.0 270 > th dose independent rect. 22 3
49 200.22 atmosphere 1015.0 10 < th dose dependent rect. 22 7
58 200.90 humidity 80.0 90 > th dose independent rect. 22 6
60 200.99 precipitation 0.1 270 < th dose independent rect. 21 5
61 200.99 precipitation 0.1 270 < th dose dependent rect. 21 5
64 201.29 atmosphere 1015.0 270 < th dose dependent rect. 21 5
67 201.49 radiation 1.0 270 < th dose dependent rect. 21 5
69 201.50 temperature 30.0 270 < th dose independent rect. 21 5
70 201.50 humidity 50.0 270 > th dose independent rect. 21 5
73 201.50 atmosphere 995.0 270 > th dose independent rect. 21 5
74 201.50 radiation 1.0 270 < th dose independent rect. 21 5
79 201.50 temperature 10.0 270 > th dose independent rect. 2 19
87 201.60 wind 9.0 270 < th dose independent rect. 21 5
89 201.76 atmosphere 1015.0 270 < th dose dependent rect. 22 3
94 202.06 wind 9.0 270 < th dose dependent rect. 22 3
98 202.26 humidity 80.0 270 > th dose independent rect. 3 3
99 202.30 atmosphere 995.0 270 > th dose independent rect. 2 19
101 202.43 atmosphere 1015.0 270 < th dose independent rect. 2 19
112 202.95 humidity 60.0 10 > th dose dependent rect. 22 7
113 202.97 temperature 15.0 270 > th dose independent rect. 7 19
122 203.28 atmosphere 1010.0 270 < th dose independent rect. 21 5
123 203.36 precipitation 0.1 270 < th dose independent rect. 2 19
124 203.36 precipitation 0.1 270 < th dose dependent rect. 2 19
126 203.38 radiation 40.0 270 < th dose dependent rect. 15 15
127 203.40 wind 9.0 270 < th dose independent rect. 2 19
137 203.63 humidity 80.0 90 > th dose independent rect. 4 5
141 203.70 temperature 15.0 270 > th dose independent rect. 6 21
148 203.86 wind 3.0 10 < th dose independent rect. 5 3
153 204.05 radiation 10.0 270 < th dose dependent rect. 2 19
157 204.08 radiation 20.0 270 < th dose independent rect. 16 14
161 204.17 wind 9.0 270 < th dose independent rect. 6 10
166 204.25 precipitation 0.1 270 < th dose independent rect. 6 21
168 204.25 precipitation 0.1 270 < th dose dependent rect. 6 21
172 204.34 atmosphere 1010.0 270 < th dose independent rect. 22 3
174 204.37 precipitation 0.1 270 < th dose independent rect. 22 3
175 204.37 precipitation 0.1 270 < th dose dependent rect. 22 3
180 204.45 humidity 60.0 270 > th dose dependent rect. 3 3
183 204.50 precipitation 0.1 270 < th dose independent rect. 7 19
186 204.50 radiation 30.0 270 < th dose dependent rect. 2 7
187 204.50 precipitation 0.1 270 < th dose dependent rect. 7 19
188 204.51 wind 5.0 270 < th dose independent rect. 22 3
192 204.56 humidity 80.0 270 > th dose independent rect. 2 5
203 204.73 radiation 1.0 270 < th dose independent rect. 2 19
206 204.74 temperature 30.0 270 < th dose independent rect. 22 3
207 204.74 humidity 50.0 270 > th dose independent rect. 22 3
210 204.74 atmosphere 995.0 270 > th dose independent rect. 22 3
211 204.74 radiation 1.0 270 < th dose independent rect. 22 3
216 204.74 temperature 10.0 270 > th dose independent rect. 1 21
217 204.74 radiation 1.0 270 < th dose dependent rect. 22 3
222 204.76 wind 9.0 270 < th dose independent rect. 22 3
226 204.80 precipitation 0.1 270 < th dose independent rect. 6 10
227 204.80 precipitation 0.1 270 < th dose dependent rect. 6 10
231 204.84 wind 5.0 270 < th dose independent rect. 3 3
232 204.84 wind 9.0 270 < th dose dependent rect. 3 3
235 204.85 wind 9.0 270 < th dose independent rect. 6 21
240 204.93 temperature 10.0 270 > th dose independent rect. 6 10
241 204.93 atmosphere 1015.0 270 < th dose independent rect. 6 10
242 204.93 temperature 10.0 270 > th dose independent rect. 16 14
243 204.93 radiation 40.0 270 < th dose independent rect. 16 14
269 205.07 radiation 1.0 10 < th dose dependent rect. 22 18
270 205.08 wind 9.0 270 < th dose independent rect. 7 19
283 205.22 radiation 1.0 10 < th dose dependent rect. 22 16
285 205.25 wind 7.0 270 < th dose independent rect. 2 5
288 205.27 wind 5.0 90 < th dose dependent rect. 5 2
290 205.31 radiation 20.0 270 < th dose independent rect. 2 5
295 205.35 humidity 50.0 270 > th dose dependent rect. 2 5
301 205.47 wind 9.0 270 < th dose independent rect. 16 14
305 205.56 radiation 40.0 270 < th dose dependent rect. 2 5
309 205.61 temperature 10.0 270 > th dose independent rect. 3 3
311 205.61 temperature 30.0 270 < th dose independent rect. 3 3
312 205.61 humidity 50.0 270 > th dose independent rect. 3 3
315 205.61 atmosphere 995.0 270 > th dose independent rect. 3 3
316 205.61 atmosphere 1015.0 270 < th dose independent rect. 3 3
317 205.61 radiation 20.0 270 < th dose independent rect. 3 3
328 205.71 atmosphere 995.0 270 > th dose independent rect. 16 14
331 205.73 temperature 10.0 270 > th dose independent rect. 2 5
333 205.73 temperature 30.0 270 < th dose independent rect. 2 5
334 205.73 humidity 50.0 270 > th dose independent rect. 2 5
336 205.73 atmosphere 995.0 270 > th dose independent rect. 2 5
337 205.73 atmosphere 1015.0 270 < th dose independent rect. 2 5
348 205.79 radiation 1.0 10 < th dose dependent rect. 22 8
352 205.85 radiation 1.0 10 < th dose dependent rect. 22 14
361 205.90 radiation 40.0 270 < th dose dependent rect. 3 3
362 205.91 wind 9.0 270 < th dose dependent rect. 2 5
368 205.99 precipitation 0.1 270 < th dose independent rect. 3 3
370 205.99 precipitation 0.1 270 < th dose independent rect. 2 5
371 205.99 precipitation 0.1 270 < th dose dependent rect. 3 3
372 205.99 precipitation 0.1 270 < th dose dependent rect. 2 5
393 206.20 wind 9.0 10 < th dose independent rect. 22 7
395 206.20 temperature 30.0 10 < th dose independent rect. 22 7
396 206.20 humidity 50.0 10 > th dose independent rect. 22 7
399 206.20 atmosphere 995.0 10 > th dose independent rect. 22 7
400 206.20 radiation 1.0 10 < th dose independent rect. 22 7
407 206.20 temperature 10.0 10 > th dose independent rect. 5 17
409 206.20 atmosphere 1015.0 10 < th dose independent rect. 5 17
414 206.23 radiation 1.0 10 < th dose independent rect. 22 16
438 206.27 radiation 1.0 270 < th dose dependent rect. 3 16
439 206.28 radiation 1.0 10 < th dose dependent rect. 22 10
455 206.42 radiation 20.0 270 < th dose independent rect. 2 7
461 206.45 humidity 70.0 90 > th dose dependent rect. 5 2
524 206.59 atmosphere 995.0 270 > th dose independent rect. 1 21
566 206.81 humidity 50.0 270 > th dose dependent rect. 2 7
575 206.86 radiation 1.0 10 < th dose independent rect. 22 14
593 206.99 wind 9.0 270 < th dose independent rect. 1 21
599 207.06 precipitation 0.1 10 < th dose independent rect. 5 17
600 207.06 precipitation 0.1 10 < th dose dependent rect. 5 17
605 207.15 atmosphere 995.0 10 > th dose independent rect. 5 17
629 207.31 wind 5.0 10 < th dose dependent rect. 5 3
637 207.37 temperature 15.0 270 > th dose independent rect. 21 16
644 207.42 wind 9.0 30 < th dose independent rect. 5 17
656 207.51 precipitation 0.1 270 < th dose independent rect. 1 21
659 207.51 precipitation 0.1 270 < th dose dependent rect. 1 21
721 207.88 atmosphere 995.0 270 > th dose independent rect. 6 10
723 207.89 atmosphere 1015.0 10 < th dose independent rect. 22 7
733 207.98 temperature 10.0 270 > th dose dependent rect. 3 3
776 208.26 wind 9.0 10 < th dose dependent rect. 22 7
814 208.37 atmosphere 1010.0 90 < th dose independent rect. 5 2
828 208.46 radiation 1.0 270 > th dose independent rect. 6 10
856 208.59 temperature 20.0 10 > th dose independent rect. 8 21
944 208.99 wind 1.0 270 > th dose independent rect. 6 10
990 209.17 temperature 10.0 270 > th dose dependent rect. 2 5
996 209.20 atmosphere 1015.0 270 < th dose independent rect. 7 19