Os08g0452200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0452200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 350.59 | 0.88 | 3.61 | -1.93 | 0.2 | 6.75 | -1.02 | -32.1 | -0.258 | 17.9 | 999.8 | 227 | -- | -- |
| 361.82 | 0.893 | 3.26 | 0.00242 | 0.191 | 1.01 | -1.06 | -- | -0.257 | 18 | 999.8 | 227 | -- | -- |
| 352.6 | 0.875 | 3.62 | -1.96 | 0.215 | 6.96 | -- | -33.3 | -0.263 | 16.4 | 999.7 | 221 | -- | -- |
| 364.52 | 0.895 | 3.26 | 0.0134 | 0.189 | 1.01 | -- | -- | -0.261 | 17.3 | 999.7 | 221 | -- | -- |
| 355 | 0.878 | 3.61 | -1.93 | -- | 6.86 | -- | -32.7 | -0.266 | -- | 999.6 | 221 | -- | -- |
| 389.1 | 0.925 | 3.27 | 0.179 | 0.2 | -- | -1.03 | -- | -0.322 | 17.9 | -- | -- | -- | -- |
| 391.48 | 0.927 | 3.27 | 0.189 | 0.204 | -- | -- | -- | -0.325 | 16.8 | -- | -- | -- | -- |
| 366.38 | 0.895 | 3.26 | 0.00595 | -- | 1.01 | -- | -- | -0.265 | -- | 999.6 | 221 | -- | -- |
| 364.52 | 0.894 | 3.26 | -- | 0.188 | 1.01 | -- | -- | -0.262 | 17.3 | 999.7 | 221 | -- | -- |
| 393.68 | 0.927 | 3.27 | 0.181 | -- | -- | -- | -- | -0.331 | -- | -- | -- | -- | -- |
| 392.42 | 0.927 | 3.28 | -- | 0.201 | -- | -- | -- | -0.346 | 16.8 | -- | -- | -- | -- |
| 366.38 | 0.894 | 3.26 | -- | -- | 1.01 | -- | -- | -0.266 | -- | 999.7 | 180 | -- | -- |
| 394.55 | 0.927 | 3.28 | -- | -- | -- | -- | -- | -0.351 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 346.93 | temperature | 30 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 3 | 347.26 | temperature | 30 | 4320 | < th | dose independent | rect. | 19 | 15 |
| 7 | 347.74 | temperature | 30 | 4320 | < th | dose independent | rect. | 23 | 11 |
| 13 | 348.01 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 16 | 348.47 | temperature | 30 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 34 | 348.71 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 19 | 20 |
| 52 | 348.85 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 17 | 22 |
| 76 | 349.67 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 21 | 14 |
| 164 | 350.86 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 12 | 22 |
| 180 | 351.10 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 4 | 23 |
| 196 | 351.44 | temperature | 30 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 212 | 351.46 | temperature | 30 | 4320 | < th | dose independent | sin | 9 | NA |
| 213 | 351.48 | atmosphere | 1000 | 270 | < th | dose independent | no | NA | NA |
| 214 | 351.48 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 16 | 18 |
| 218 | 351.57 | temperature | 30 | 4320 | > th | dose independent | sin | 9 | NA |
| 259 | 352.00 | atmosphere | 1000 | 270 | > th | dose independent | no | NA | NA |
| 326 | 352.48 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 19 | 15 |
| 333 | 352.57 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 22 | 3 |
| 336 | 352.61 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 379 | 352.87 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 9 | 23 |
| 382 | 352.89 | temperature | 30 | 4320 | > th | dose dependent | sin | 8 | NA |
| 388 | 352.95 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 23 | 15 |
| 393 | 352.98 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 20 | 19 |
| 403 | 353.05 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 21 | 17 |
| 467 | 353.39 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 18 |
| 471 | 353.42 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 23 | 11 |
| 482 | 353.49 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 523 | 353.78 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 22 | 13 |
| 533 | 353.85 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 611 | 354.39 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 20 | 22 |
| 670 | 354.60 | atmosphere | 1000 | 10 | < th | dose independent | sin | 5 | NA |
| 701 | 354.69 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 23 | 23 |
| 709 | 354.79 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 1 | 23 |
| 712 | 354.80 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 9 | 23 |
| 721 | 354.83 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 21 | 21 |
| 746 | 354.92 | atmosphere | 1000 | 10 | > th | dose independent | sin | 5 | NA |
| 748 | 354.92 | atmosphere | 1000 | 10 | > th | dose independent | no | NA | NA |
| 777 | 355.00 | atmosphere | 1000 | 270 | < th | dose independent | sin | 8 | NA |
| 809 | 355.16 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 19 | 8 |
| 852 | 355.27 | atmosphere | 1000 | 270 | > th | dose independent | sin | 9 | NA |
| 868 | 355.33 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 21 | 11 |
| 950 | 355.67 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 23 | 11 |