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Os08g0449500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0172) R2 : 0.369
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.666 (0.0419) R2dC : 0.349 R2C : 0.348
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.126 (0.0363) R2dN8 : 0.0217 R2N8 : 0.02
σ : 0.325
deviance : 48.33
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_____
C
peak time of C : 1.94
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.22 0.271 10.6 -0.661 0.56 0.304 0.175 0.79 0.0546 1.26 29.28 233 -- --
33.56 0.27 10.6 -0.564 0.555 0.365 0.236 -- 0.0739 1.29 29.38 233 -- --
33.34 0.269 10.6 -0.678 0.558 0.305 -- 0.887 0.0515 1.19 29.22 232 -- --
33.77 0.271 10.6 -0.57 0.555 0.384 -- -- 0.0697 1.2 29.43 229 -- --
51.07 0.335 10.6 -0.532 -- 0.483 -- 0.133 0.103 -- 29.22 232 -- --
37.25 0.286 10.6 -0.62 0.678 -- 0.396 -- 0.0581 2.07 -- -- -- --
37.83 0.288 10.6 -0.631 0.677 -- -- -- 0.0561 1.97 -- -- -- --
47.83 0.322 10.6 -0.477 -- 0.529 -- -- 0.101 -- 28.6 140 -- --
42.12 0.302 10.6 -- 0.533 0.478 -- -- 0.121 0.99 29.5 227 -- --
65.47 0.378 10.6 -0.603 -- -- -- -- 0.0718 -- -- -- -- --
48.33 0.325 10.6 -- 0.666 -- -- -- 0.126 1.94 -- -- -- --
53.83 0.342 10.6 -- -- 0.544 -- -- 0.181 -- 28.19 131 -- --
75.07 0.404 10.6 -- -- -- -- -- 0.139 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.16 temperature 30.0 270 < th dose independent rect. 2 17
6 32.47 temperature 30.0 270 < th dose independent rect. 23 22
11 32.63 humidity 70.0 270 > th dose independent rect. 15 16
32 32.95 radiation 20.0 720 < th dose independent rect. 24 9
36 33.03 temperature 30.0 270 < th dose independent rect. 13 22
37 33.04 temperature 30.0 270 < th dose independent sin 2 NA
39 33.04 humidity 70.0 90 > th dose independent rect. 17 18
41 33.07 humidity 70.0 90 > th dose independent rect. 15 20
46 33.15 humidity 70.0 270 > th dose independent rect. 13 21
48 33.17 temperature 30.0 720 < th dose independent rect. 23 16
54 33.20 temperature 30.0 720 < th dose independent sin 5 NA
55 33.20 radiation 20.0 720 < th dose independent rect. 17 17
60 33.21 temperature 30.0 720 < th dose independent rect. 20 16
81 33.34 radiation 20.0 720 > th dose dependent rect. 8 1
99 33.41 temperature 30.0 270 < th dose independent rect. 9 10
102 33.42 temperature 30.0 720 < th dose independent rect. 1 10
103 33.44 radiation 20.0 720 > th dose independent rect. 8 1
104 33.44 temperature 30.0 720 < th dose independent rect. 3 8
109 33.45 radiation 40.0 720 < th dose dependent rect. 24 10
112 33.47 humidity 70.0 270 > th dose independent rect. 23 21
140 33.53 radiation 40.0 720 < th dose independent rect. 20 16
142 33.53 radiation 40.0 720 < th dose dependent rect. 17 17
144 33.54 temperature 30.0 270 < th dose independent rect. 15 16
157 33.58 radiation 30.0 720 > th dose independent rect. 16 17
165 33.60 radiation 20.0 720 < th dose independent sin 10 NA
206 33.62 temperature 30.0 270 < th dose independent sin 10 NA
216 33.63 atmosphere 995.0 43200 > th dose independent rect. 15 7
224 33.63 radiation 40.0 720 < th dose independent rect. 15 22
225 33.64 temperature 30.0 270 < th dose independent sin 22 NA
233 33.65 radiation 20.0 720 < th dose independent rect. 20 14
248 33.67 temperature 30.0 270 > th dose independent rect. 14 23
249 33.67 temperature 30.0 270 < th dose independent rect. 9 23
253 33.68 humidity 60.0 720 < th dose independent rect. 11 4
261 33.68 humidity 70.0 90 < th dose independent rect. 12 23
275 33.69 temperature 30.0 270 < th dose independent no NA NA
278 33.69 temperature 30.0 720 > th dose independent rect. 8 8
297 33.69 radiation 20.0 270 < th dose dependent rect. 15 17
305 33.70 radiation 20.0 270 < th dose dependent rect. 14 19
306 33.71 humidity 60.0 720 < th dose independent rect. 12 1
307 33.71 humidity 70.0 720 < th dose independent rect. 9 8
315 33.71 radiation 40.0 720 < th dose dependent sin 9 NA
320 33.72 humidity 70.0 720 < th dose independent rect. 9 6
321 33.72 temperature 30.0 720 < th dose independent rect. 7 7
328 33.72 humidity 90.0 720 < th dose dependent rect. 8 8
335 33.73 precipitation 0.1 1440 > th dose independent rect. 21 4
342 33.73 temperature 30.0 720 < th dose independent rect. 7 9
354 33.73 temperature 30.0 270 > th dose independent rect. 18 23
355 33.73 precipitation 0.1 1440 > th dose dependent rect. 21 4
361 33.74 humidity 70.0 90 > th dose independent sin 11 NA
369 33.74 radiation 40.0 720 < th dose dependent rect. 20 15
375 33.75 humidity 60.0 4320 > th dose independent rect. 10 5
382 33.76 humidity 60.0 4320 > th dose independent rect. 11 2
407 33.78 temperature 30.0 720 < th dose independent rect. 9 7
414 33.78 humidity 70.0 270 > th dose independent rect. 9 23
428 33.79 humidity 70.0 720 > th dose independent rect. 24 14
431 33.79 humidity 80.0 720 < th dose dependent rect. 12 1
437 33.80 humidity 60.0 4320 < th dose independent rect. 11 4
438 33.80 temperature 30.0 720 < th dose independent rect. 5 8
455 33.82 temperature 30.0 270 > th dose independent no NA NA
456 33.82 radiation 20.0 720 < th dose independent rect. 7 2
466 33.82 temperature 30.0 270 > th dose independent rect. 8 11
499 33.82 humidity 70.0 10 > th dose independent rect. 18 16
585 33.82 temperature 25.0 720 > th dose dependent rect. 8 1
586 33.82 humidity 80.0 720 < th dose dependent rect. 11 4
591 33.83 temperature 30.0 270 > th dose independent sin 0 NA
593 33.83 atmosphere 995.0 43200 < th dose independent rect. 15 7
687 33.87 precipitation 0.1 43200 > th dose dependent rect. 17 4
697 33.88 temperature 30.0 720 > th dose independent sin 5 NA
731 33.89 humidity 60.0 4320 > th dose independent rect. 20 20
896 33.95 atmosphere 1005.0 270 > th dose independent rect. 15 17
898 33.95 humidity 70.0 720 > th dose independent rect. 20 19
910 33.96 precipitation 0.1 43200 > th dose dependent rect. 20 1
930 33.97 humidity 50.0 14400 < th dose independent rect. 15 21
941 33.98 humidity 70.0 720 < th dose independent sin 2 NA
943 33.98 precipitation 0.1 43200 > th dose independent rect. 19 2
997 34.00 humidity 70.0 90 > th dose independent sin 16 NA
999 34.00 humidity 50.0 14400 < th dose independent sin 13 NA