Os08g0448100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0448100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 396.17 | 0.935 | 3.68 | -1.3 | 0.0867 | 1.65 | 1.61 | 2.55 | -0.526 | 22.6 | 89.49 | 1139 | -- | -- |
| 407.7 | 0.94 | 3.7 | -1.04 | 0.0693 | 1.65 | 1.22 | -- | -0.511 | 22.1 | 89.36 | 1116 | -- | -- |
| 405.61 | 0.938 | 3.69 | -1.27 | 0.0558 | 1.6 | -- | 1.79 | -0.526 | 22.7 | 89.58 | 1146 | -- | -- |
| 411.12 | 0.944 | 3.7 | -1.04 | 0.0514 | 1.7 | -- | -- | -0.484 | 21.7 | 90.88 | 1121 | -- | -- |
| 405.69 | 0.938 | 3.69 | -1.28 | -- | 1.56 | -- | 1.85 | -0.528 | -- | 89.63 | 1176 | -- | -- |
| 452.51 | 0.997 | 3.76 | -0.829 | 0.194 | -- | -0.79 | -- | -0.795 | 11.6 | -- | -- | -- | -- |
| 455.1 | 0.999 | 3.76 | -0.86 | 0.202 | -- | -- | -- | -0.797 | 12.5 | -- | -- | -- | -- |
| 411.19 | 0.944 | 3.7 | -1.05 | -- | 1.69 | -- | -- | -0.488 | -- | 90.96 | 1130 | -- | -- |
| 439.27 | 0.976 | 3.68 | -- | 0.0655 | 1.6 | -- | -- | -0.403 | 19.6 | 91.57 | 1084 | -- | -- |
| 457.66 | 1 | 3.77 | -0.866 | -- | -- | -- | -- | -0.801 | -- | -- | -- | -- | -- |
| 474.57 | 1.02 | 3.74 | -- | 0.215 | -- | -- | -- | -0.701 | 12.7 | -- | -- | -- | -- |
| 439.49 | 0.976 | 3.68 | -- | -- | 1.57 | -- | -- | -0.413 | -- | 91.62 | 1083 | -- | -- |
| 477.47 | 1.02 | 3.75 | -- | -- | -- | -- | -- | -0.704 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 384.52 | humidity | 80 | 14400 | > th | dose independent | rect. | 12 | 12 |
| 21 | 385.98 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 10 |
| 22 | 386.00 | humidity | 80 | 14400 | < th | dose independent | rect. | 12 | 12 |
| 24 | 386.05 | humidity | 80 | 14400 | > th | dose independent | sin | 17 | NA |
| 69 | 387.29 | humidity | 80 | 14400 | < th | dose independent | sin | 17 | NA |
| 70 | 387.32 | wind | 3 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 107 | 388.18 | humidity | 70 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 113 | 388.39 | humidity | 80 | 14400 | > th | dose independent | rect. | 6 | 19 |
| 115 | 388.44 | humidity | 70 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 142 | 388.70 | humidity | 80 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 182 | 389.17 | humidity | 80 | 14400 | > th | dose independent | rect. | 20 | 23 |
| 183 | 389.22 | humidity | 80 | 14400 | > th | dose independent | rect. | 12 | 23 |
| 186 | 389.25 | humidity | 70 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 187 | 389.26 | humidity | 70 | 14400 | > th | dose dependent | rect. | 13 | 12 |
| 194 | 389.40 | humidity | 80 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 198 | 389.43 | humidity | 80 | 14400 | > th | dose independent | no | NA | NA |
| 228 | 389.66 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 255 | 389.83 | humidity | 50 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 278 | 389.97 | humidity | 70 | 14400 | > th | dose dependent | sin | 17 | NA |
| 295 | 390.06 | humidity | 80 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 342 | 390.29 | humidity | 60 | 14400 | > th | dose dependent | rect. | 13 | 20 |
| 424 | 390.59 | humidity | 70 | 14400 | > th | dose dependent | rect. | 11 | 22 |
| 425 | 390.60 | humidity | 80 | 14400 | < th | dose independent | no | NA | NA |
| 441 | 390.66 | humidity | 90 | 14400 | < th | dose dependent | rect. | 14 | 11 |
| 447 | 390.70 | humidity | 80 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 517 | 390.92 | humidity | 70 | 14400 | > th | dose dependent | rect. | 5 | 21 |
| 551 | 390.99 | humidity | 70 | 14400 | > th | dose dependent | rect. | 23 | 23 |
| 564 | 391.04 | humidity | 80 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 565 | 391.05 | humidity | 70 | 14400 | > th | dose dependent | no | NA | NA |
| 589 | 391.14 | humidity | 70 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 617 | 391.23 | humidity | 70 | 14400 | > th | dose dependent | rect. | 16 | 23 |
| 658 | 391.37 | humidity | 90 | 14400 | < th | dose dependent | rect. | 13 | 20 |
| 663 | 391.39 | humidity | 90 | 14400 | < th | dose dependent | rect. | 13 | 17 |
| 745 | 391.63 | humidity | 90 | 14400 | < th | dose dependent | sin | 15 | NA |
| 974 | 392.31 | humidity | 60 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 979 | 392.33 | humidity | 70 | 14400 | > th | dose dependent | rect. | 13 | 3 |